Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB2O43679 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB2O43679 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB2O43679 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB2O43679 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 RNY4P14-201ENST00000363656 96 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RNY1P12-201ENST00000364251 105 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RNU6-1078P-201ENST00000364522 103 ntBASIC3.57□□□□□ -1.84
LDB2O43679 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LDB2O43679 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RNU2-47P-201ENST00000410649 186 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RNU4-78P-201ENST00000410940 126 ntBASIC3.57□□□□□ -1.84
LDB2O43679 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB2O43679 HMGN1P24-201ENST00000412282 298 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC092447.6-201ENST00000414578 210 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC017079.2-201ENST00000416102 485 ntBASIC3.57□□□□□ -1.84
LDB2O43679 DBIP2-201ENST00000419076 262 ntBASIC3.57□□□□□ -1.84
LDB2O43679 ELOCP4-201ENST00000420090 333 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 AC093156.1-201ENST00000440382 670 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AL353572.1-201ENST00000442490 417 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB2O43679 AC108059.3-201ENST00000456388 214 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RPL31P58-201ENST00000469001 379 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RPL7L1P8-201ENST00000469911 741 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC068647.1-201ENST00000489539 2265 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC079382.1-201ENST00000493346 557 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC116353.2-201ENST00000505332 712 ntBASIC3.57□□□□□ -1.84
LDB2O43679 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB2O43679 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
LDB2O43679 AC105914.1-201ENST00000511798 226 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB2O43679 SNORA70.18-201ENST00000516696 98 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RNA5SP337-201ENST00000517007 109 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.57□□□□□ -1.84
LDB2O43679 AC026403.1-201ENST00000518938 295 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC022616.3-201ENST00000523940 148 ntBASIC3.57□□□□□ -1.84
LDB2O43679 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 SUB1P2-201ENST00000556401 297 ntBASIC3.57□□□□□ -1.84
LDB2O43679 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.57□□□□□ -1.84
LDB2O43679 AC012507.3-201ENST00000603556 477 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AL031176.1-201ENST00000604554 466 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC007363.1-201ENST00000604736 620 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC007038.2-201ENST00000608095 740 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC104458.1-201ENST00000608243 463 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC004908.2-201ENST00000609090 574 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC017083.3-201ENST00000609955 700 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
LDB2O43679 AC009093.8-201ENST00000641769 292 ntBASIC3.57□□□□□ -1.84
LDB2O43679 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDB2O43679 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
LDB2O43679 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
LDB2O43679 RNU6-1085P-201ENST00000363576 107 ntBASIC3.56□□□□□ -1.84
LDB2O43679 SNORD46.1-201ENST00000364139 104 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RNA5SP235-201ENST00000365411 114 ntBASIC3.56□□□□□ -1.84
LDB2O43679 Y_RNA.402-201ENST00000383972 102 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RNU6-780P-201ENST00000391030 104 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RNU6-837P-201ENST00000391056 108 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RNU2-62P-201ENST00000410868 191 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RN7SKP53-201ENST00000411337 315 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 CRYBB2P1-203ENST00000415709 538 ntBASIC3.56□□□□□ -1.84
LDB2O43679 SYF2P2-201ENST00000417620 583 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 AC007283.2-201ENST00000424739 197 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
LDB2O43679 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.56□□□□□ -1.84
LDB2O43679 AC020893.1-201ENST00000502452 580 ntBASIC3.56□□□□□ -1.84
LDB2O43679 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 FAM92A1P2-202ENST00000504766 877 ntBASIC3.56□□□□□ -1.84
LDB2O43679 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 AC104619.4-201ENST00000510773 249 ntBASIC3.56□□□□□ -1.84
LDB2O43679 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 RNU6-798P-201ENST00000516912 103 ntBASIC3.56□□□□□ -1.84
LDB2O43679 RNU4-60P-201ENST00000517239 135 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.56□□□□□ -1.84
LDB2O43679 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.56□□□□□ -1.84
LDB2O43679 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.56□□□□□ -1.84
LDB2O43679 AK6P1-201ENST00000540219 478 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 AL512310.1-201ENST00000548639 172 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AL157687.1-201ENST00000554853 619 ntBASIC3.56□□□□□ -1.84
LDB2O43679 OR4T1P-201ENST00000554933 911 ntBASIC3.56□□□□□ -1.84
LDB2O43679 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.56□□□□□ -1.84
LDB2O43679 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms