Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OR4K6P-201ENST00000416478 897 ntBASIC2.17□□□□□ -2.06
SGCEO43556 MTATP6P27-201ENST00000416987 621 ntBASIC2.17□□□□□ -2.06
SGCEO43556 SEPT2P1-201ENST00000419651 180 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AC092047.1-201ENST00000424997 240 ntBASIC2.17□□□□□ -2.06
SGCEO43556 MTCYBP15-201ENST00000433123 1127 ntBASIC2.17□□□□□ -2.06
SGCEO43556 PGBD4P3-201ENST00000440731 581 ntBASIC2.17□□□□□ -2.06
SGCEO43556 PIGFP3-201ENST00000441918 722 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AL031659.1-201ENST00000447075 539 ntBASIC2.17□□□□□ -2.06
SGCEO43556 MTCYBP11-201ENST00000447254 1109 ntBASIC2.17□□□□□ -2.06
SGCEO43556 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.17□□□□□ -2.06
SGCEO43556 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.17□□□□□ -2.06
SGCEO43556 AL109933.2-201ENST00000452651 260 ntBASIC2.17□□□□□ -2.06
SGCEO43556 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.17□□□□□ -2.06
SGCEO43556 AP1S2P1-201ENST00000457344 379 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.17□□□□□ -2.06
SGCEO43556 AC138853.1-201ENST00000503549 823 ntBASIC2.17□□□□□ -2.06
SGCEO43556 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.17□□□□□ -2.06
SGCEO43556 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.17□□□□□ -2.06
SGCEO43556 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.17□□□□□ -2.06
SGCEO43556 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.17□□□□□ -2.06
SGCEO43556 AC079148.1-201ENST00000565944 819 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.17□□□□□ -2.06
SGCEO43556 AL161729.4-201ENST00000604650 476 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AP000238.1-201ENST00000608759 426 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.17□□□□□ -2.06
SGCEO43556 U4.3-201ENST00000621047 82 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.17□□□□□ -2.06
SGCEO43556 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SGCEO43556 AP003485.2-201ENST00000623636 610 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AL118508.4-201ENST00000624142 1176 ntBASIC2.17□□□□□ -2.06
SGCEO43556 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.17□□□□□ -2.06
SGCEO43556 MIR203B-201ENST00000636080 86 ntBASIC2.17□□□□□ -2.06
SGCEO43556 MIR4275-201ENST00000636486 87 ntBASIC2.17□□□□□ -2.06
SGCEO43556 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SGCEO43556 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SGCEO43556 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
SGCEO43556 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SGCEO43556 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
SGCEO43556 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
SGCEO43556 U3.37-201ENST00000408528 213 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AL357078.2-201ENST00000416486 427 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.16□□□□□ -2.06
SGCEO43556 AC098826.1-201ENST00000433943 471 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.16□□□□□ -2.06
SGCEO43556 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.16□□□□□ -2.06
SGCEO43556 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.16□□□□□ -2.06
SGCEO43556 COX6CP18-201ENST00000448769 222 ntBASIC2.16□□□□□ -2.06
SGCEO43556 OFD1P3Y-201ENST00000453312 783 ntBASIC2.16□□□□□ -2.06
SGCEO43556 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.16□□□□□ -2.06
SGCEO43556 AC004924.1-201ENST00000480160 781 ntBASIC2.16□□□□□ -2.06
SGCEO43556 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SGCEO43556 SUMO2P6-201ENST00000505273 288 ntBASIC2.16□□□□□ -2.06
SGCEO43556 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.16□□□□□ -2.06
SGCEO43556 AC114786.4-201ENST00000508771 728 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.16□□□□□ -2.06
SGCEO43556 AC114797.1-201ENST00000514003 728 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.16□□□□□ -2.06
SGCEO43556 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
SGCEO43556 SCARNA11.3-201ENST00000517276 130 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC023632.1-201ENST00000518463 375 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC022634.1-201ENST00000520765 532 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.16□□□□□ -2.06
SGCEO43556 AC087465.1-201ENST00000560574 245 ntBASIC2.16□□□□□ -2.06
SGCEO43556 AC004067.1-201ENST00000608733 700 ntBASIC2.16□□□□□ -2.06
SGCEO43556 HMGB1P24-202ENST00000615653 685 ntBASIC2.16□□□□□ -2.06
SGCEO43556 VN1R7P-201ENST00000619242 903 ntBASIC2.16□□□□□ -2.06
SGCEO43556 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SGCEO43556 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SGCEO43556 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.16□□□□□ -2.06
SGCEO43556 OR4G2P-202ENST00000641004 1759 ntBASIC2.15□□□□□ -2.06
SGCEO43556 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SGCEO43556 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SGCEO43556 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.15□□□□□ -2.07
SGCEO43556 SNORA41-201ENST00000384675 132 ntBASIC2.15□□□□□ -2.07
SGCEO43556 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SGCEO43556 FAM204CP-201ENST00000424489 642 ntBASIC2.15□□□□□ -2.07
SGCEO43556 WARS2P1-201ENST00000429678 537 ntBASIC2.15□□□□□ -2.07
SGCEO43556 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 Z82210.1-201ENST00000440037 231 ntBASIC2.15□□□□□ -2.07
SGCEO43556 BNIP3P2-201ENST00000441221 577 ntBASIC2.15□□□□□ -2.07
SGCEO43556 OR10R1P-201ENST00000441524 1141 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 IPO7P1-201ENST00000442031 636 ntBASIC2.15□□□□□ -2.07
SGCEO43556 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
SGCEO43556 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
SGCEO43556 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 AL353718.1-201ENST00000451028 517 ntBASIC2.15□□□□□ -2.07
SGCEO43556 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 AC026410.2-201ENST00000460281 156 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.15□□□□□ -2.07
SGCEO43556 BTF3P12-201ENST00000519620 469 ntBASIC2.15□□□□□ -2.07
SGCEO43556 HSPA8P13-201ENST00000523715 472 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AP001189.2-201ENST00000527320 189 ntBASIC2.15□□□□□ -2.07
SGCEO43556 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.15□□□□□ -2.07
SGCEO43556 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.15□□□□□ -2.07
SGCEO43556 AP001429.1-201ENST00000602568 530 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AC068313.1-201ENST00000604028 1008 ntBASIC2.15□□□□□ -2.07
SGCEO43556 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms