Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.71□□□□□ -1.82
SMAD6O43541 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SMAD6O43541 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 Y_RNA.672-201ENST00000516289 104 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.71□□□□□ -1.82
SMAD6O43541 AP003181.2-201ENST00000528941 181 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 HIF1AP1-201ENST00000553642 175 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.71□□□□□ -1.82
SMAD6O43541 AC107954.1-201ENST00000565906 727 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
SMAD6O43541 RPS3AP23-202ENST00000574601 686 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 MIR5047-201ENST00000579212 100 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.71□□□□□ -1.82
SMAD6O43541 SNORD39.3-201ENST00000584451 71 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC017100.2-201ENST00000584628 355 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.71□□□□□ -1.82
SMAD6O43541 SNRPGP15-201ENST00000600149 222 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 NRBF2P5-201ENST00000603087 788 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AL359999.1-201ENST00000604513 294 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 BNIP3P10-201ENST00000605360 577 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC055876.5-201ENST00000605667 259 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.71□□□□□ -1.82
SMAD6O43541 AC006023.2-201ENST00000609916 167 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC135507.2-201ENST00000612443 309 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 AC009233.1-201ENST00000616477 371 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.71□□□□□ -1.82
SMAD6O43541 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.71□□□□□ -1.82
SMAD6O43541 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.71□□□□□ -1.82
SMAD6O43541 AC024614.3-201ENST00000637860 256 ntBASIC3.71□□□□□ -1.82
SMAD6O43541 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMAD6O43541 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMAD6O43541 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMAD6O43541 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.71□□□□□ -1.82
SMAD6O43541 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.7□□□□□ -1.82
SMAD6O43541 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMAD6O43541 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
SMAD6O43541 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMAD6O43541 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.7□□□□□ -1.82
SMAD6O43541 Y_RNA.86-201ENST00000363020 111 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 RNU6-282P-201ENST00000365357 103 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 MIR449B-201ENST00000384995 97 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 RPS20P2-201ENST00000402520 389 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
SMAD6O43541 MIR1250-201ENST00000408098 113 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.7□□□□□ -1.82
SMAD6O43541 AC093578.1-201ENST00000415219 368 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC133104.1-201ENST00000429100 218 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 HMGN2P31-201ENST00000432430 273 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC132479.1-201ENST00000449160 144 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 MTND1P12-201ENST00000455231 147 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 RPS15AP17-201ENST00000470598 390 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 VN1R17P-201ENST00000472048 1090 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC005726.1-201ENST00000494679 427 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 TMEM251P1-201ENST00000503717 318 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.7□□□□□ -1.82
SMAD6O43541 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.7□□□□□ -1.82
SMAD6O43541 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.7□□□□□ -1.82
SMAD6O43541 AC034159.1-201ENST00000513885 583 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 Y_RNA.675-201ENST00000516389 149 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 SNORA70.18-201ENST00000516696 98 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 Y_RNA.701-201ENST00000516812 110 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 RNU6-1003P-201ENST00000517099 105 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.7□□□□□ -1.82
SMAD6O43541 AP003034.1-201ENST00000534621 422 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.7□□□□□ -1.82
SMAD6O43541 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.7□□□□□ -1.82
SMAD6O43541 ARL2BPP2-201ENST00000550907 489 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.7□□□□□ -1.82
SMAD6O43541 FRG1KP-201ENST00000623592 341 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMAD6O43541 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SMAD6O43541 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMAD6O43541 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMAD6O43541 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
SMAD6O43541 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 Y_RNA.142-201ENST00000363491 102 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RNU6-335P-201ENST00000364563 113 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 MIR591-201ENST00000385290 95 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RNU6-952P-201ENST00000391164 108 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 HMGB1P17-201ENST00000403495 628 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RNU6-908P-201ENST00000410160 94 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC069218.2-201ENST00000411665 344 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC244098.2-201ENST00000422068 99 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 RPL23AP20-201ENST00000447965 421 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AL358232.1-201ENST00000448030 501 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms