Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SRGAP3O43295 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SRGAP3O43295 MTND5P16-201ENST00000460269 1703 ntBASIC4.9□□□□□ -1.62
SRGAP3O43295 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 RNU6-213P-201ENST00000384051 104 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC069218.2-201ENST00000411665 344 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC245054.2-201ENST00000415639 319 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.9□□□□□ -1.63
SRGAP3O43295 Z82205.1-201ENST00000428456 297 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.9□□□□□ -1.63
SRGAP3O43295 Y_RNA.635-201ENST00000459041 101 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 RPS4XP10-201ENST00000465034 731 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AL049714.1-201ENST00000466686 347 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 PPIAP15-201ENST00000479662 484 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AL163540.1-201ENST00000485382 386 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC106872.2-201ENST00000494303 480 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.9□□□□□ -1.63
SRGAP3O43295 KLHL2P1-201ENST00000508691 521 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC026402.1-201ENST00000513642 170 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 SNORD27.1-201ENST00000516319 72 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 Y_RNA.711-201ENST00000516993 102 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 AC090615.1-201ENST00000577519 154 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 POLR3GP2-201ENST00000588366 668 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.9□□□□□ -1.63
SRGAP3O43295 uc_338.15-201ENST00000615470 191 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 AC138305.3-201ENST00000624988 240 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRGAP3O43295 AC011460.1-201ENST00000636268 1834 ntBASIC4.9□□□□□ -1.63
SRGAP3O43295 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SRGAP3O43295 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SRGAP3O43295 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SRGAP3O43295 AC130650.2-201ENST00000618736 2403 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.89□□□□□ -1.63
SRGAP3O43295 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.89□□□□□ -1.63
SRGAP3O43295 RNU6-1293P-201ENST00000384077 107 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 SNORD116-29-201ENST00000384516 83 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AL606923.1-201ENST00000406616 190 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC018630.2-202ENST00000422992 927 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.89□□□□□ -1.63
SRGAP3O43295 AC108734.1-201ENST00000439549 399 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 HMGB1P37-201ENST00000439613 609 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 RPS29P7-201ENST00000439662 171 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 RANP8-201ENST00000444720 713 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AL451050.1-201ENST00000450126 415 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC104073.1-201ENST00000451988 151 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 VN1R17P-201ENST00000472048 1090 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC005741.1-201ENST00000511094 432 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 RNU6-1046P-201ENST00000516538 107 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 RNU6-273P-201ENST00000516937 96 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 Y_RNA.718-201ENST00000517110 102 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 SNORA25.17-201ENST00000517184 124 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC103843.2-201ENST00000530523 682 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 OR4P1P-201ENST00000530808 1136 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.89□□□□□ -1.63
SRGAP3O43295 AC093012.1-202ENST00000549403 582 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.89□□□□□ -1.63
SRGAP3O43295 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.89□□□□□ -1.63
SRGAP3O43295 PSMA6P4-201ENST00000603247 718 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 APOOP1-201ENST00000604695 592 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC004908.2-201ENST00000609090 574 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 RNU6-156P-201ENST00000621869 107 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 AC067931.1-201ENST00000624190 671 ntBASIC4.89□□□□□ -1.63
SRGAP3O43295 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.89□□□□□ -1.63
SRGAP3O43295 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SRGAP3O43295 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SRGAP3O43295 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.89□□□□□ -1.63
SRGAP3O43295 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.88□□□□□ -1.63
SRGAP3O43295 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.88□□□□□ -1.63
SRGAP3O43295 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRGAP3O43295 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SRGAP3O43295 MTCO1P12-201ENST00000414273 1543 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRGAP3O43295 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SRGAP3O43295 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SRGAP3O43295 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SRGAP3O43295 SNORA62.1-201ENST00000364287 154 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 RNU6-1226P-201ENST00000384317 107 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 RNA5SP39-201ENST00000411245 120 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 RNU6-1304P-201ENST00000411374 106 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 PSMA6P3-201ENST00000428242 164 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 UBE2V1P13-201ENST00000436983 439 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 FTH1P1-201ENST00000437933 532 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 AL354710.1-201ENST00000453641 246 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 AC021382.1-201ENST00000483523 359 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 AC083904.1-201ENST00000487828 231 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.88□□□□□ -1.63
SRGAP3O43295 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.88□□□□□ -1.63
SRGAP3O43295 AL080274.1-201ENST00000605565 220 ntBASIC4.88□□□□□ -1.63
SRGAP3O43295 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.88□□□□□ -1.63
SRGAP3O43295 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.88□□□□□ -1.63
SRGAP3O43295 AL591424.2-201ENST00000617023 128 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms