Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN3O15551 AC109583.1-201ENST00000432156 268 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN3O15551 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN3O15551 RPL23AP11-201ENST00000475260 469 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN3O15551 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
CLDN3O15551 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CLDN3O15551 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AMZ2P1-203ENST00000565833 850 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AC068135.2-201ENST00000569293 1028 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.93□□□□□ -1.94
CLDN3O15551 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AC007998.5-201ENST00000622938 237 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AP003485.2-201ENST00000623636 610 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 MIR4275-201ENST00000636486 87 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 AC099654.7-201ENST00000635788 2127 ntBASIC2.93□□□□□ -1.94
CLDN3O15551 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CLDN3O15551 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN3O15551 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN3O15551 AL049641.1-201ENST00000441055 1948 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN3O15551 RNU6-270P-201ENST00000364131 105 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 RNU6-1035P-201ENST00000384477 107 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN3O15551 NUP35P1-201ENST00000422734 947 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL953862.1-201ENST00000423016 168 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 YWHAZP7-201ENST00000436906 631 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN3O15551 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN3O15551 DDX3P2-201ENST00000446138 111 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 MTATP6P14-201ENST00000455189 673 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL109741.2-201ENST00000455561 343 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 snoU109.3-201ENST00000459477 145 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC005410.1-202ENST00000460347 485 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.92□□□□□ -1.94
CLDN3O15551 AC104563.1-201ENST00000476147 376 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC021382.1-201ENST00000483523 359 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 RPL9P33-201ENST00000484311 566 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.92□□□□□ -1.94
CLDN3O15551 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN3O15551 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
CLDN3O15551 AC079395.1-201ENST00000510981 262 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC090136.1-201ENST00000520009 240 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AP002748.2-201ENST00000528671 348 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 NBEAP1-201ENST00000554452 979 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL132857.1-201ENST00000555180 708 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL355836.1-201ENST00000555951 870 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 RPL23AP84-201ENST00000571193 464 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AL353997.4-201ENST00000586196 166 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC020895.1-201ENST00000595362 272 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC068313.1-201ENST00000604028 1008 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC004696.1-201ENST00000614345 607 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 AC068880.5-201ENST00000624331 290 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.92□□□□□ -1.94
CLDN3O15551 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CLDN3O15551 MTND4P9-201ENST00000507819 1346 ntBASIC2.92□□□□□ -1.94
CLDN3O15551 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CLDN3O15551 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC007785.2-201ENST00000598627 1916 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 RNU6-289P-201ENST00000364093 107 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 Y_RNA.465-201ENST00000384293 102 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 MIR620-201ENST00000385232 95 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 RNA5SP354-201ENST00000391247 136 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 ERHP2-201ENST00000402323 299 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AL356057.3-201ENST00000402607 340 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 Z85995.1-201ENST00000415547 335 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 ZYG11AP1-201ENST00000430329 837 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 MRPL50P4-201ENST00000446432 475 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AP000936.2-201ENST00000447151 681 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC108938.1-201ENST00000451204 136 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC092155.2-201ENST00000454675 477 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC233702.1-201ENST00000482905 502 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC108729.1-201ENST00000487812 947 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC009901.1-201ENST00000506703 541 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC096725.1-201ENST00000514266 313 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 RNU6-1282P-201ENST00000516735 96 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC087373.1-201ENST00000524920 491 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN3O15551 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AC023813.2-201ENST00000564321 469 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN3O15551 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN3O15551 AP001269.3-201ENST00000588718 329 ntBASIC2.91□□□□□ -1.94
CLDN3O15551 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN3O15551 RPL23AP78-201ENST00000599928 470 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms