Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-217P-201ENST00000384164 104 ntBASIC2.55□□□□□ -2
LSM1O15116 MIR767-201ENST00000390228 109 ntBASIC2.55□□□□□ -2
LSM1O15116 AL031679.1-201ENST00000400616 525 ntBASIC2.55□□□□□ -2
LSM1O15116 SNORA11-201ENST00000408789 128 ntBASIC2.55□□□□□ -2
LSM1O15116 USP9YP27-201ENST00000418455 438 ntBASIC2.55□□□□□ -2
LSM1O15116 AL139421.1-201ENST00000423010 169 ntBASIC2.55□□□□□ -2
LSM1O15116 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 GTF2IP20-201ENST00000431663 360 ntBASIC2.55□□□□□ -2
LSM1O15116 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.55□□□□□ -2
LSM1O15116 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 PIGFP3-201ENST00000441918 722 ntBASIC2.55□□□□□ -2
LSM1O15116 AL135938.1-201ENST00000443141 297 ntBASIC2.55□□□□□ -2
LSM1O15116 MTND4LP3-201ENST00000468320 276 ntBASIC2.55□□□□□ -2
LSM1O15116 RPL31P50-201ENST00000471002 296 ntBASIC2.55□□□□□ -2
LSM1O15116 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
LSM1O15116 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.55□□□□□ -2
LSM1O15116 MTCYBP17-201ENST00000503579 789 ntBASIC2.55□□□□□ -2
LSM1O15116 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.55□□□□□ -2
LSM1O15116 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.55□□□□□ -2
LSM1O15116 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.55□□□□□ -2
LSM1O15116 RNU6-467P-201ENST00000517027 110 ntBASIC2.55□□□□□ -2
LSM1O15116 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 AC100870.1-201ENST00000522035 505 ntBASIC2.55□□□□□ -2
LSM1O15116 AP002748.2-201ENST00000528671 348 ntBASIC2.55□□□□□ -2
LSM1O15116 AC022080.3-201ENST00000544433 482 ntBASIC2.55□□□□□ -2
LSM1O15116 AC123904.3-201ENST00000547218 814 ntBASIC2.55□□□□□ -2
LSM1O15116 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
LSM1O15116 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.55□□□□□ -2
LSM1O15116 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.55□□□□□ -2
LSM1O15116 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.55□□□□□ -2
LSM1O15116 AC126365.2-201ENST00000580630 379 ntBASIC2.55□□□□□ -2
LSM1O15116 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
LSM1O15116 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.55□□□□□ -2
LSM1O15116 AL603758.1-201ENST00000618654 241 ntBASIC2.55□□□□□ -2
LSM1O15116 AC073308.1-201ENST00000623696 305 ntBASIC2.55□□□□□ -2
LSM1O15116 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
LSM1O15116 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
LSM1O15116 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
LSM1O15116 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.54□□□□□ -2
LSM1O15116 RNU1-100P-201ENST00000365255 165 ntBASIC2.54□□□□□ -2
LSM1O15116 SNORA44-201ENST00000384584 132 ntBASIC2.54□□□□□ -2
LSM1O15116 U3.20-201ENST00000390909 217 ntBASIC2.54□□□□□ -2
LSM1O15116 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LSM1O15116 MORF4L1P6-201ENST00000418771 268 ntBASIC2.54□□□□□ -2
LSM1O15116 CYCSP32-201ENST00000440548 321 ntBASIC2.54□□□□□ -2
LSM1O15116 FGF7P5-201ENST00000441829 291 ntBASIC2.54□□□□□ -2
LSM1O15116 ARPC3P5-201ENST00000448802 534 ntBASIC2.54□□□□□ -2
LSM1O15116 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
LSM1O15116 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.54□□□□□ -2
LSM1O15116 AC022447.3-201ENST00000506865 495 ntBASIC2.54□□□□□ -2
LSM1O15116 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
LSM1O15116 AC092451.2-201ENST00000538746 658 ntBASIC2.54□□□□□ -2
LSM1O15116 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.54□□□□□ -2
LSM1O15116 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.54□□□□□ -2
LSM1O15116 AC104072.1-201ENST00000568817 668 ntBASIC2.54□□□□□ -2
LSM1O15116 AL645944.1-201ENST00000603857 493 ntBASIC2.54□□□□□ -2
LSM1O15116 AC011451.2-201ENST00000604303 598 ntBASIC2.54□□□□□ -2
LSM1O15116 AL158211.4-201ENST00000606988 584 ntBASIC2.54□□□□□ -2
LSM1O15116 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
LSM1O15116 AC093673.2-201ENST00000609674 331 ntBASIC2.54□□□□□ -2
LSM1O15116 AC009237.15-201ENST00000610252 501 ntBASIC2.54□□□□□ -2
LSM1O15116 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LSM1O15116 AL022578.1-201ENST00000439330 1433 ntBASIC2.53□□□□□ -2
LSM1O15116 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.53□□□□□ -2
LSM1O15116 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.53□□□□□ -2
LSM1O15116 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LSM1O15116 RNU4-51P-201ENST00000364206 140 ntBASIC2.53□□□□□ -2
LSM1O15116 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.53□□□□□ -2
LSM1O15116 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
LSM1O15116 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
LSM1O15116 RNU6-952P-201ENST00000391164 108 ntBASIC2.53□□□□□ -2
LSM1O15116 MTND4P3-201ENST00000417829 541 ntBASIC2.53□□□□□ -2
LSM1O15116 MRPS36P1-201ENST00000421291 307 ntBASIC2.53□□□□□ -2
LSM1O15116 AC098614.2-201ENST00000426040 255 ntBASIC2.53□□□□□ -2
LSM1O15116 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.53□□□□□ -2
LSM1O15116 OR4K11P-201ENST00000431829 904 ntBASIC2.53□□□□□ -2
LSM1O15116 AC087499.2-201ENST00000432861 149 ntBASIC2.53□□□□□ -2
LSM1O15116 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.53□□□□□ -2
LSM1O15116 Z82210.1-201ENST00000440037 231 ntBASIC2.53□□□□□ -2
LSM1O15116 RPS3AP12-201ENST00000443616 753 ntBASIC2.53□□□□□ -2
LSM1O15116 CBWD4P-201ENST00000445695 655 ntBASIC2.53□□□□□ -2
LSM1O15116 HMGN1P5-201ENST00000448591 263 ntBASIC2.53□□□□□ -2
LSM1O15116 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
LSM1O15116 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.53□□□□□ -2
LSM1O15116 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.53□□□□□ -2
LSM1O15116 RNU7-136P-201ENST00000458819 69 ntBASIC2.53□□□□□ -2
LSM1O15116 S100A11P2-201ENST00000467589 312 ntBASIC2.53□□□□□ -2
LSM1O15116 AC090096.1-201ENST00000489168 390 ntBASIC2.53□□□□□ -2
LSM1O15116 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.53□□□□□ -2
LSM1O15116 AC069306.1-201ENST00000507006 843 ntBASIC2.53□□□□□ -2
LSM1O15116 AC026801.2-201ENST00000515352 425 ntBASIC2.53□□□□□ -2
LSM1O15116 RNU6-714P-201ENST00000516963 103 ntBASIC2.53□□□□□ -2
LSM1O15116 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
LSM1O15116 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.53□□□□□ -2
LSM1O15116 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.53□□□□□ -2
LSM1O15116 AL391261.3-201ENST00000557194 520 ntBASIC2.53□□□□□ -2
LSM1O15116 TRAV28-201ENST00000557548 323 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms