Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AL390862.1-201ENST00000635467 1469 ntBASIC1.34□□□□□ -2.19
HMGN4O00479 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
HMGN4O00479 AC123912.3-201ENST00000600907 1367 ntBASIC1.34□□□□□ -2.2
HMGN4O00479 CR848007.1-201ENST00000442354 1699 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC087359.1-201ENST00000508335 1740 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGN4O00479 RNU5D-1-201ENST00000363299 116 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 SNORA38-201ENST00000363946 132 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HMGN4O00479 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGN4O00479 AL121882.1-201ENST00000422893 417 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AL365496.1-201ENST00000426885 215 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 NDUFA5P10-201ENST00000432147 357 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC090774.1-201ENST00000435925 246 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN4O00479 RPS26P30-201ENST00000443431 335 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC010095.1-201ENST00000443543 144 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGN4O00479 PSPHP1-201ENST00000450062 261 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGN4O00479 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGN4O00479 FO393415.2-201ENST00000480085 343 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AP001960.1-201ENST00000506494 658 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGN4O00479 AC008837.1-201ENST00000511513 412 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGN4O00479 AP000889.1-201ENST00000530968 660 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
HMGN4O00479 SNRPGP16-201ENST00000533275 226 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 CYCSP26-201ENST00000534107 320 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC015720.1-201ENST00000565251 277 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HMGN4O00479 AL669831.4-202ENST00000590817 238 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC107214.2-201ENST00000608204 634 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AC020658.4-201ENST00000613987 684 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AL161629.2-201ENST00000615347 275 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 UCA1.1-201ENST00000620952 75 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AL353748.2-201ENST00000622148 471 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 AP005901.5-201ENST00000545779 1796 ntBASIC1.33□□□□□ -2.2
HMGN4O00479 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 RNA5SP258-201ENST00000362750 119 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 RNA5SP354-201ENST00000391247 136 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMGN4O00479 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGN4O00479 OFD1P18Y-201ENST00000420889 959 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 AC007560.1-201ENST00000426912 237 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 VN1R108P-201ENST00000431580 830 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 GTF2IP7-202ENST00000436677 309 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AL360221.1-201ENST00000445989 335 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 SNORA31.18-201ENST00000517043 134 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 BTF3P12-201ENST00000519620 469 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 AC139103.1-201ENST00000534696 1030 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HMGN4O00479 AC025588.4-201ENST00000615802 908 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGN4O00479 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 AC241585.2-209ENST00000638217 143 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGN4O00479 MFSD8-245ENST00000641743 948 ntBASIC1.32□□□□□ -2.2
HMGN4O00479 CDC27P3-201ENST00000635418 1910 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 RNU6-374P-201ENST00000364146 108 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 Y_RNA.493-201ENST00000384422 102 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 MT-TC-201ENST00000387405 66 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HMGN4O00479 MIR1261-201ENST00000408659 82 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 RPS3AP44-201ENST00000425466 790 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 HMGB1P18-201ENST00000438801 619 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 ARF4P4-201ENST00000439608 520 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 AC092798.1-201ENST00000458542 409 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 AC096751.1-202ENST00000502691 1067 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 COL6A4P2-205ENST00000509855 506 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 AC117522.2-201ENST00000510049 657 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
HMGN4O00479 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN4O00479 AC022634.1-201ENST00000520765 532 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.31□□□□□ -2.2
HMGN4O00479 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN4O00479 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.31□□□□□ -2.2
HMGN4O00479 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN4O00479 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN4O00479 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGN4O00479 MIR3609-201ENST00000582661 80 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 MIR3616-201ENST00000584070 92 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HMGN4O00479 AC128687.1-201ENST00000605304 619 ntBASIC1.31□□□□□ -2.2
HMGN4O00479 AC005021.1-201ENST00000608730 355 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms