Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
O00370 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.31□□□□□ -1.88
O00370 AL353743.1-202ENST00000431724 1695 ntBASIC3.31□□□□□ -1.88
O00370 RNU6-500P-201ENST00000362349 107 ntBASIC3.31□□□□□ -1.88
O00370 SNORA38.1-201ENST00000364172 131 ntBASIC3.31□□□□□ -1.88
O00370 RNU6-809P-201ENST00000384461 107 ntBASIC3.31□□□□□ -1.88
O00370 AL031577.2-201ENST00000404133 280 ntBASIC3.31□□□□□ -1.88
O00370 MIR1302-8-201ENST00000408342 128 ntBASIC3.31□□□□□ -1.88
O00370 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
O00370 RNA5SP38-201ENST00000410750 119 ntBASIC3.31□□□□□ -1.88
O00370 RN7SKP58-201ENST00000411010 305 ntBASIC3.31□□□□□ -1.88
O00370 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
O00370 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.31□□□□□ -1.88
O00370 RPL23AP69-201ENST00000431134 458 ntBASIC3.31□□□□□ -1.88
O00370 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.31□□□□□ -1.88
O00370 LARP1BP3-201ENST00000437229 869 ntBASIC3.31□□□□□ -1.88
O00370 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.31□□□□□ -1.88
O00370 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.31□□□□□ -1.88
O00370 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.31□□□□□ -1.88
O00370 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
O00370 MTND1P22-201ENST00000510572 951 ntBASIC3.31□□□□□ -1.88
O00370 AC017037.2-201ENST00000513850 890 ntBASIC3.31□□□□□ -1.88
O00370 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.31□□□□□ -1.88
O00370 AC068587.4-201ENST00000533893 186 ntBASIC3.31□□□□□ -1.88
O00370 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.31□□□□□ -1.88
O00370 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.31□□□□□ -1.88
O00370 SETP7-201ENST00000552169 453 ntBASIC3.31□□□□□ -1.88
O00370 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.31□□□□□ -1.88
O00370 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
O00370 ROCK1P1-201ENST00000573767 549 ntBASIC3.31□□□□□ -1.88
O00370 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.31□□□□□ -1.88
O00370 AF131215.7-201ENST00000602443 707 ntBASIC3.31□□□□□ -1.88
O00370 AL022099.1-201ENST00000604551 712 ntBASIC3.31□□□□□ -1.88
O00370 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.31□□□□□ -1.88
O00370 MIR6076-201ENST00000617521 113 ntBASIC3.31□□□□□ -1.88
O00370 AL356585.4-201ENST00000623078 1229 ntBASIC3.31□□□□□ -1.88
O00370 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
O00370 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
O00370 MTCO1P9-201ENST00000505577 1534 ntBASIC3.3□□□□□ -1.88
O00370 AL513185.3-201ENST00000433335 1300 ntBASIC3.3□□□□□ -1.88
O00370 RNU6-501P-201ENST00000364072 100 ntBASIC3.3□□□□□ -1.88
O00370 Y_RNA.548-201ENST00000384656 105 ntBASIC3.3□□□□□ -1.88
O00370 MT-TH-201ENST00000387441 69 ntBASIC3.3□□□□□ -1.88
O00370 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
O00370 RPS4XP3-201ENST00000398541 413 ntBASIC3.3□□□□□ -1.88
O00370 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.3□□□□□ -1.88
O00370 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
O00370 AC090960.1-201ENST00000421072 306 ntBASIC3.3□□□□□ -1.88
O00370 USP9YP36-201ENST00000424581 829 ntBASIC3.3□□□□□ -1.88
O00370 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 OR4K11P-201ENST00000431829 904 ntBASIC3.3□□□□□ -1.88
O00370 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 RSU1P2-202ENST00000437884 485 ntBASIC3.3□□□□□ -1.88
O00370 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
O00370 AC006445.1-201ENST00000491925 405 ntBASIC3.3□□□□□ -1.88
O00370 OR2A20P-203ENST00000498397 1268 ntBASIC3.3□□□□□ -1.88
O00370 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.3□□□□□ -1.88
O00370 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
O00370 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.3□□□□□ -1.88
O00370 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.3□□□□□ -1.88
O00370 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
O00370 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
O00370 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.3□□□□□ -1.88
O00370 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 AP005205.1-201ENST00000563503 508 ntBASIC3.3□□□□□ -1.88
O00370 PCMTD1P2-201ENST00000565017 355 ntBASIC3.3□□□□□ -1.88
O00370 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.3□□□□□ -1.88
O00370 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.3□□□□□ -1.88
O00370 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.3□□□□□ -1.88
O00370 U73023.1-201ENST00000603134 700 ntBASIC3.3□□□□□ -1.88
O00370 Z94722.1-201ENST00000604328 474 ntBASIC3.3□□□□□ -1.88
O00370 TUG1_1.1-201ENST00000610654 145 ntBASIC3.3□□□□□ -1.88
O00370 AL353748.2-201ENST00000622148 471 ntBASIC3.3□□□□□ -1.88
O00370 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
O00370 MIR3651-201ENST00000630427 90 ntBASIC3.3□□□□□ -1.88
O00370 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
O00370 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
O00370 AC011460.1-201ENST00000636268 1834 ntBASIC3.3□□□□□ -1.88
O00370 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
O00370 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
O00370 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
O00370 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
O00370 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.29□□□□□ -1.88
O00370 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
O00370 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
O00370 RNU5F-6P-201ENST00000362979 116 ntBASIC3.29□□□□□ -1.88
O00370 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
O00370 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.29□□□□□ -1.88
O00370 TMEM167AP1-201ENST00000423409 219 ntBASIC3.29□□□□□ -1.88
O00370 AC093151.1-201ENST00000427711 313 ntBASIC3.29□□□□□ -1.88
O00370 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.29□□□□□ -1.88
O00370 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms