Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC073308.1-201ENST00000623696 305 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AF246928.1-201ENST00000623768 87 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 AL392088.2-201ENST00000637607 285 ntBASIC3.23□□□□□ -1.89
CCDC188H7C350 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC188H7C350 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC188H7C350 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC188H7C350 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC188H7C350 RN7SKP123-201ENST00000410732 291 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC188H7C350 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 RPL37P21-201ENST00000435890 276 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 TAAR7P-201ENST00000436141 242 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 MTCO3P45-201ENST00000443036 613 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 ZNF114P1-201ENST00000453500 292 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 DSTNP2-201ENST00000504533 515 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC188H7C350 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AL133153.1-201ENST00000557756 303 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC188H7C350 MIR3609-201ENST00000582661 80 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CCDC188H7C350 AC008751.2-201ENST00000597885 980 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AL031985.2-201ENST00000600955 480 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 MTCYBP22-201ENST00000603788 447 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC068313.1-201ENST00000604028 1008 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC013553.2-201ENST00000604244 589 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC013476.2-201ENST00000614456 459 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AC004777.1-201ENST00000624317 287 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC188H7C350 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC188H7C350 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC188H7C350 MTND5P33-201ENST00000571250 1450 ntBASIC3.22□□□□□ -1.89
CCDC188H7C350 AL355596.1-201ENST00000565399 3996 ntBASIC3.21□□□□□ -1.89
CCDC188H7C350 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.89
CCDC188H7C350 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 MIR208A-201ENST00000362287 71 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 SNORA71.3-201ENST00000362582 128 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 SNORD46.1-201ENST00000364139 104 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 MIR19A-201ENST00000384878 82 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 HSFY4P-201ENST00000415994 1181 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 SPA17P1-201ENST00000416656 452 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 GAPDHP27-201ENST00000447427 1020 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC188H7C350 SNRPGP6-201ENST00000451124 220 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 PRSS3P4-201ENST00000453323 162 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 BZW1P2-201ENST00000473537 826 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 OR2A20P-203ENST00000498397 1268 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 MRPS33P3-201ENST00000513456 322 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 RNU6-232P-201ENST00000517144 64 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 TRMT10BP1-201ENST00000519377 943 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 OR5G4P-201ENST00000525251 760 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AP002748.2-201ENST00000528671 348 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC145350.1-201ENST00000567426 208 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC188H7C350 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC012119.1-201ENST00000603184 222 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC090132.2-201ENST00000615881 347 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC244100.1-202ENST00000621554 382 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC093591.3-201ENST00000634516 308 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 AC108206.1-201ENST00000570186 4159 ntBASIC3.21□□□□□ -1.9
CCDC188H7C350 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC188H7C350 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCDC188H7C350 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms