Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL137014.1-201ENST00000420490 1226 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND4P20-201ENST00000424125 869 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC236972.1-201ENST00000433225 199 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 RPS20P5-201ENST00000434808 360 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 FTH1P1-201ENST00000437933 532 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL445567.1-201ENST00000439121 144 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC093156.1-201ENST00000440382 670 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 HMGN2P16-201ENST00000456802 261 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC012181.1-201ENST00000479895 423 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 VN1R104P-201ENST00000505115 1009 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 RNA5SP367-201ENST00000516557 118 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 SNRPGP16-201ENST00000533275 226 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 MIR4474-201ENST00000579189 78 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 BDH2P1-201ENST00000602288 736 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC004223.4-201ENST00000612426 332 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 Z99129.2-201ENST00000619967 314 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND4P16-201ENST00000466108 1367 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 HSP90AA4P-202ENST00000506915 2228 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 SNORA18.3-201ENST00000384122 132 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-769P-201ENST00000384407 104 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 MIR1289-1-201ENST00000408836 144 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 MTCO1P17-201ENST00000411522 491 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL7P8-201ENST00000411964 730 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 RPL23AP39-201ENST00000415533 405 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL365203.2-201ENST00000423444 196 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC234781.2-201ENST00000426370 994 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 RPS24P13-201ENST00000442520 397 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC072039.1-201ENST00000477611 581 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC021382.1-201ENST00000483523 359 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC093278.1-201ENST00000494700 600 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC022447.3-201ENST00000506865 495 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND5P4-201ENST00000514978 288 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 SNORA31.8-201ENST00000516327 108 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC245166.1-201ENST00000521012 253 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AP004247.1-201ENST00000531556 1289 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 UBE2L4-201ENST00000587688 464 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC107214.2-201ENST00000608204 634 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC006023.2-201ENST00000609916 167 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 TUG1_1.1-201ENST00000610654 145 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AL158801.5-201ENST00000623123 465 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 AC092192.1-201ENST00000633154 1018 ntBASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3□□□□□ -1.93
NEDD8-MDP1E9PL57 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-97P-201ENST00000363387 104 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 USP9YP26-201ENST00000421008 661 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 CETN4P-201ENST00000432407 469 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC105272.1-201ENST00000438604 198 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RAC1P7-201ENST00000445367 377 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC004924.1-201ENST00000480160 781 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC005178.1-201ENST00000508392 440 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 HIGD1AP13-201ENST00000509878 289 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 MTND1P22-201ENST00000510572 951 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RNA5SP356-201ENST00000515972 94 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU6-759P-201ENST00000516740 103 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD8-MDP1E9PL57 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms