Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AC022884.2-201ENST00000578535 580 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 FGF7P1-201ENST00000582820 288 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 MIR3922-201ENST00000585192 84 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL592436.1-201ENST00000605135 558 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL365204.3-201ENST00000612448 685 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 U6.114-201ENST00000636407 96 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 PRO1804-201ENST00000623780 2050 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 MTND4P12-201ENST00000498999 1377 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 NACAP2-201ENST00000318548 624 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 Y_RNA.231-201ENST00000364358 102 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 RNA5SP267-201ENST00000364893 126 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 RNU6-213P-201ENST00000384051 104 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 RNU6-1181P-201ENST00000384191 106 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 U8.11-201ENST00000384699 133 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 U8.12-201ENST00000384701 133 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 Y_RNA.576-201ENST00000384781 102 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC018630.2-202ENST00000422992 927 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL157831.1-201ENST00000426134 473 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC093106.2-201ENST00000428212 385 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL162395.1-201ENST00000457882 422 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 U8.18-201ENST00000459285 133 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 HMGN2P26-201ENST00000463169 339 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC114786.4-201ENST00000508771 728 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 BNIP3P6-201ENST00000549284 499 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AC005261.5-201ENST00000596280 355 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AP002360.3-201ENST00000607673 710 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL445363.3-201ENST00000623080 671 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AP001350.1-201ENST00000601906 1524 ntBASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC85CA6NKD9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6-797P-201ENST00000363101 109 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6-701P-201ENST00000384059 107 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6-1009P-201ENST00000390996 107 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU4-46P-201ENST00000410818 138 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 OR6C66P-201ENST00000414917 930 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC245054.1-201ENST00000420944 258 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RPL21P112-201ENST00000434403 463 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 MTND1P11-201ENST00000456661 876 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RPL5P30-201ENST00000465511 891 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RN7SL807P-201ENST00000470923 297 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC106872.2-201ENST00000494303 480 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 MLLT10P2-201ENST00000506434 249 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC117522.3-201ENST00000507974 584 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC004062.1-201ENST00000509926 645 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6-507P-201ENST00000516045 100 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RNU6-390P-201ENST00000516259 103 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC135507.2-201ENST00000612443 309 ntBASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC85CA6NKD9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms