Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC025588.4-201ENST00000615802 908 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 IGHVIII-44-202ENST00000636235 289 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 AC111188.2-201ENST00000529697 1387 ntBASIC0.9□□□□□ -2.27
LINC01549A6NIU2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.9□□□□□ -2.27
LINC01549A6NIU2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 RNU6-60P-201ENST00000364792 103 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 MIR1323-201ENST00000408090 73 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 MIR1285-1-201ENST00000408593 84 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 Z92545.1-201ENST00000411782 234 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 PAICSP7-201ENST00000419829 962 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL365496.1-201ENST00000426885 215 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 RPL23AP6-201ENST00000446637 472 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC021205.1-201ENST00000468797 348 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AP003717.3-201ENST00000544832 1180 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL022099.1-201ENST00000604551 712 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC019131.2-201ENST00000609071 870 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AL592494.3-201ENST00000609485 464 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 AC079395.3-201ENST00000615161 484 ntBASIC0.89□□□□□ -2.27
LINC01549A6NIU2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.89□□□□□ -2.27
LINC01549A6NIU2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 ZNF29P-201ENST00000225587 168 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 RNU4-82P-201ENST00000362443 140 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 RNA5SP508-201ENST00000411327 119 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 OR51A5P-201ENST00000415429 942 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 BOLA3P4-201ENST00000418151 400 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 HSFY1P1-201ENST00000423928 1178 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AL590762.3-201ENST00000436372 640 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AL049873.1-201ENST00000480540 376 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AC008549.1-201ENST00000512900 643 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 MIR3200-201ENST00000580767 85 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 RMST_6.1-201ENST00000611980 203 ntBASIC0.88□□□□□ -2.27
LINC01549A6NIU2 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC0.88□□□□□ -2.27
LINC01549A6NIU2 RNU1-105P-201ENST00000363470 161 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MIR483-201ENST00000385070 76 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 RPL30P13-201ENST00000418873 348 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 RPS15AP40-201ENST00000419621 391 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MRPL35P3-201ENST00000421557 364 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC096920.1-201ENST00000423991 241 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC079780.1-201ENST00000428259 207 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC093716.1-201ENST00000435923 377 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 RNU1-123P-201ENST00000458950 160 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MTCYBP18-201ENST00000501056 747 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC243960.4-201ENST00000600532 288 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AL035411.2-201ENST00000604022 421 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MIR8081-201ENST00000611533 95 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AL592148.2-201ENST00000612210 372 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AL161629.2-201ENST00000615347 275 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MIR6864-201ENST00000617935 70 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC010149.2-201ENST00000637608 315 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AP000560.1-201ENST00000624150 1937 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 AC002543.1-201ENST00000299783 1954 ntBASIC0.87□□□□□ -2.27
LINC01549A6NIU2 RNA5SP276-201ENST00000362580 94 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 SNORD114-1-201ENST00000362705 72 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 MIR504-201ENST00000385065 83 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 U8.13-201ENST00000390842 128 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 BTF3L4P2-201ENST00000392798 346 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AC092648.1-201ENST00000425870 423 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AL358075.3-201ENST00000426289 226 ntBASIC0.86□□□□□ -2.27
LINC01549A6NIU2 AL009174.1-201ENST00000426577 416 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms