Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 EOGT-210ENST00000615922 1931 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 MIR708-201ENST00000390708 88 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 CISD1P1-201ENST00000393907 327 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 PPIAP31-201ENST00000405422 495 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 RNU4-46P-201ENST00000410818 138 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-193P-201ENST00000410977 107 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-373P-201ENST00000411247 98 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC108032.1-201ENST00000416706 207 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AL356095.1-201ENST00000417217 199 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AL590383.1-201ENST00000428602 75 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 PRDX3P3-201ENST00000447765 522 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 MTCYBP18-201ENST00000501056 747 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 RPL38P4-201ENST00000502376 214 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AP001804.3-201ENST00000525146 880 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC006064.5-201ENST00000541782 248 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC005730.3-201ENST00000583067 366 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC022893.3-201ENST00000607665 437 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC015871.5-202ENST00000623252 701 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
MBD3L4A6NDZ8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL133412.1-201ENST00000380194 2992 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL139276.1-201ENST00000311910 1001 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 SNORA72.1-201ENST00000363485 129 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 RNU5E-4P-201ENST00000364931 120 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 RNU4-66P-201ENST00000365199 138 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MIR493-201ENST00000385254 89 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL078595.1-201ENST00000404458 226 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MIR1911-201ENST00000410783 80 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC007919.1-201ENST00000429380 217 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL121601.2-201ENST00000438019 707 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 RPL23AP46-201ENST00000438548 490 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 RNA5SP246-201ENST00000458909 119 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL132838.2-201ENST00000492041 314 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC098591.2-201ENST00000510152 315 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC023632.4-201ENST00000517783 191 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC004024.1-201ENST00000549244 247 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AL138889.2-201ENST00000603883 242 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 BNIP3P10-201ENST00000605360 577 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC034102.8-201ENST00000615146 484 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC140113.4-201ENST00000622087 222 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AC008013.2-202ENST00000637965 364 ntBASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
MBD3L4A6NDZ8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 AC008568.2-201ENST00000623862 2313 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 UBE2L2-201ENST00000254302 429 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 Y_RNA.86-201ENST00000363020 111 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 RPS12P24-201ENST00000412619 387 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 AC138393.2-201ENST00000414742 246 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 AC080125.1-201ENST00000414888 684 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 CYP4F29P-201ENST00000420685 446 ntBASIC3.76□□□□□ -1.81
MBD3L4A6NDZ8 AL451062.2-201ENST00000427515 271 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms