Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR3162-201ENST00000581818 82 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR3616-201ENST00000584070 92 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 VN1R90P-201ENST00000595717 726 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC002487.1-201ENST00000604565 994 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RMST_10.1-201ENST00000616309 154 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC104820.1-201ENST00000624183 307 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 SNORD116-23-201ENST00000384645 92 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR135A2-201ENST00000384854 100 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL139098.1-201ENST00000407291 389 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR1290-201ENST00000408735 78 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 RNA5SP508-201ENST00000411327 119 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL356379.1-201ENST00000414105 126 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 FCF1P2-201ENST00000415284 583 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL139413.1-201ENST00000421309 217 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 NDUFB4P7-201ENST00000423198 363 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL355994.1-201ENST00000424379 260 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC024082.2-201ENST00000434771 238 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 TAAR7P-201ENST00000436141 242 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL050341.1-201ENST00000447743 313 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 EEF1B2P7-201ENST00000451177 676 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL049714.1-201ENST00000466686 347 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MTCYBP17-201ENST00000503579 789 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC114781.4-201ENST00000513707 639 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-1282P-201ENST00000516735 96 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC024224.1-201ENST00000538284 609 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR3117-201ENST00000584034 78 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AC120053.1-201ENST00000607706 736 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 IGHVIII-44-202ENST00000636235 289 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 AP003399.1-201ENST00000637534 361 ntBASIC1.59□□□□□ -2.15
TRAV1-1A0A0B4J248 MTCO1P23-201ENST00000415223 1526 ntBASIC1.59□□□□□ -2.16
TRAV1-1A0A0B4J248 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC062016.1-201ENST00000355719 319 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AL445529.1-201ENST00000398713 389 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 SNORA11.2-201ENST00000408318 127 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU2-15P-201ENST00000410692 191 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC098614.2-201ENST00000426040 255 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC002542.1-201ENST00000440683 193 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RPL26P6-201ENST00000440913 438 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC114878.1-201ENST00000441166 358 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC009296.1-201ENST00000443146 155 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RPS15AP27-201ENST00000449183 343 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RFC5P1-201ENST00000454419 874 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC090453.1-201ENST00000495560 436 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RN7SL636P-201ENST00000497504 294 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 EIF4EP3-201ENST00000498782 656 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 NDUFB4P2-201ENST00000509515 391 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU2-44P-201ENST00000516795 194 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 BTF3P12-201ENST00000519620 469 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 CYCSP26-201ENST00000534107 320 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC067805.1-201ENST00000559344 470 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC011330.2-201ENST00000621680 635 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC010872.1-201ENST00000624225 675 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 AC103710.2-202ENST00000641454 2853 ntBASIC1.58□□□□□ -2.16
TRAV1-1A0A0B4J248 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 RNU6-234P-201ENST00000365229 104 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC016769.3-201ENST00000396562 315 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AL031679.1-201ENST00000400616 525 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 BEND7P1-201ENST00000422058 457 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 PTP4A1P7-201ENST00000423476 514 ntBASIC1.57□□□□□ -2.16
TRAV1-1A0A0B4J248 VN1R42P-201ENST00000424651 344 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms