Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 ATP5F1P5-201ENST00000526403 760 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC068339.2-201ENST00000534395 618 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC023158.1-201ENST00000561632 1025 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR4504-201ENST00000577413 92 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 UCA1.1-201ENST00000620952 75 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC010149.2-201ENST00000637608 315 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-98P-201ENST00000384173 107 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-339P-201ENST00000384310 107 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 RN7SKP51-201ENST00000410781 304 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AL354695.1-201ENST00000427935 228 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC015922.2-201ENST00000435593 184 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC092155.2-201ENST00000454675 477 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC107626.1-201ENST00000471084 183 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC026801.1-201ENST00000497178 464 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC027309.2-201ENST00000520566 192 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC118942.1-201ENST00000529674 1035 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC018630.1-201ENST00000541376 925 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC005332.10-201ENST00000612725 619 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC025588.4-201ENST00000615802 908 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC025016.1-201ENST00000616746 682 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AC011330.2-201ENST00000621680 635 ntBASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV1-2A0A0B4J238 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORD114-1-201ENST00000362705 72 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-198P-201ENST00000384258 104 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR504-201ENST00000385065 83 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 RNA5SP354-201ENST00000391247 136 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU4-26P-201ENST00000410270 107 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 USP9YP6-201ENST00000413550 854 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AP000949.1-201ENST00000438328 629 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 SNRPGP13-201ENST00000442212 177 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC004022.1-201ENST00000447766 1066 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AL121769.1-201ENST00000469473 401 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 COL6A4P2-205ENST00000509855 506 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR3683-201ENST00000580847 82 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR4435-1-201ENST00000582552 80 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AL355297.2-201ENST00000604792 129 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AP005137.2-201ENST00000609238 400 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC079395.3-201ENST00000615161 484 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 AC109809.1-201ENST00000619665 545 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 MIR7843-201ENST00000622274 79 ntBASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV1-2A0A0B4J238 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 U3.29-201ENST00000391296 212 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 RNA5SP80-201ENST00000410475 111 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AL513185.2-201ENST00000425543 193 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AL356867.1-201ENST00000429623 299 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 RPL36P19-201ENST00000430744 301 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AL357134.1-201ENST00000445848 426 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 ANKRD26P4-201ENST00000455755 950 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 PNPLA4P1-201ENST00000458328 305 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC021087.2-201ENST00000504656 1203 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 SNORA25.15-201ENST00000516487 89 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 snoZ278.1-201ENST00000517059 112 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 RANP3-201ENST00000530970 276 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC092470.1-201ENST00000546187 132 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 MED28P6-201ENST00000558776 231 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC090888.1-201ENST00000561335 1141 ntBASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV1-2A0A0B4J238 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms