Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 VN1R10P-201ENST00000447106 875 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 RNU6-420P-201ENST00000458780 107 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC092757.1-201ENST00000467293 467 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 MTND4LP3-201ENST00000468320 276 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC004263.1-201ENST00000479327 332 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC026436.1-201ENST00000510537 270 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 HMGB1P6-201ENST00000569046 646 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC026741.1-201ENST00000605892 482 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC091946.2-201ENST00000606105 291 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC013562.2-201ENST00000611632 603 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 DUXAP10-204ENST00000612052 616 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AL592148.2-201ENST00000612210 372 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC011330.2-201ENST00000621680 635 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AC073308.1-201ENST00000623696 305 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 AP000553.5-201ENST00000641933 54 ntBASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
USH1CQ9Y6N9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 RNU6-1066P-201ENST00000363573 105 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AL591416.1-201ENST00000404015 867 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 RNU2-52P-201ENST00000410680 190 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC019097.1-201ENST00000424783 735 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AL365496.1-201ENST00000426885 215 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 Z93242.1-201ENST00000427102 353 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 MTCYBP32-201ENST00000427945 1084 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 ARL5AP4-201ENST00000430731 512 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 RPL26P6-201ENST00000440913 438 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 IPO7P1-201ENST00000442031 636 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC092155.2-201ENST00000454675 477 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 RPL31P50-201ENST00000471002 296 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 BOLA3P3-201ENST00000505182 232 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC025768.1-201ENST00000510057 267 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AMZ2P1-203ENST00000565833 850 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 MIR4319-201ENST00000577285 85 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AC124283.4-201ENST00000581815 456 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 MIR4672-201ENST00000583126 81 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 NRBF2P5-201ENST00000603087 788 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AP000238.1-201ENST00000608759 426 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 AP005137.2-201ENST00000609238 400 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 MIR6840-201ENST00000611937 71 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 HPVC1-201ENST00000629899 1198 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 U6.101-201ENST00000637707 76 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 OR5H6-203ENST00000642105 978 ntBASIC2.27□□□□□ -2.05
USH1CQ9Y6N9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AL022578.1-201ENST00000439330 1433 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 MIR34A-201ENST00000385130 110 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 MIR325-201ENST00000385260 98 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 SRIP2-201ENST00000428470 166 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 OR4K11P-201ENST00000431829 904 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC009237.8-201ENST00000445492 379 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 COX6CP18-201ENST00000448769 222 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 USP9YP34-201ENST00000453983 808 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC079804.2-201ENST00000490376 200 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC121161.1-201ENST00000510606 652 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 ZNF971P-201ENST00000562068 1249 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC068135.2-201ENST00000569293 1028 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AP001542.2-201ENST00000593141 364 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 BNIP3P24-201ENST00000593398 557 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 VN1R90P-201ENST00000595717 726 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 RPAP2P1-201ENST00000603626 1168 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 AC010872.1-201ENST00000624225 675 ntBASIC2.26□□□□□ -2.05
USH1CQ9Y6N9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 AL136360.1-201ENST00000503377 1900 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 OR56A5-201ENST00000340110 738 ntBASIC2.25□□□□□ -2.05
USH1CQ9Y6N9 RNU5A-1-201ENST00000362698 116 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms