Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 Vault.1-201ENST00000516474 102 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 SNORA31.22-201ENST00000517204 135 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL121579.1-201ENST00000555129 305 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 NCAPGP2-201ENST00000557911 754 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RN7SL600P-201ENST00000581811 299 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC010928.3-201ENST00000587712 541 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AF038458.1-201ENST00000588406 262 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.6-201ENST00000603753 252 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.11-201ENST00000604059 253 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC008162.1-201ENST00000604718 254 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.1-201ENST00000604752 252 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.5-201ENST00000605253 252 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.12-201ENST00000605291 253 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.8-201ENST00000605353 252 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL670379.7-201ENST00000605823 252 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 MIR6758-201ENST00000620653 63 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC110801.1-201ENST00000623590 212 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC009812.4-201ENST00000569134 1805 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AC006020.1-201ENST00000420179 1854 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 AL137003.2-201ENST00000606924 2538 ntBASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHA3Q9Y5H8 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 Y_RNA.255-201ENST00000364581 97 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 SDCBPP3-201ENST00000419629 891 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 NEK4P1-201ENST00000433383 879 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 USP9YP7-201ENST00000436723 430 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 USP9YP32-201ENST00000452432 430 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 snoU13.24-201ENST00000458998 104 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AL163973.1-201ENST00000484753 577 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 PCBP2P3-201ENST00000509726 843 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 NRON-201ENST00000517270 370 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 CYCSP29-201ENST00000533731 318 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC093012.1-202ENST00000549403 582 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC007424.1-203ENST00000554613 687 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 MIR3138-201ENST00000585238 82 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC060780.3-201ENST00000589464 80 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AP001486.3-201ENST00000615334 372 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AL354950.2-201ENST00000617939 290 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC093648.1-201ENST00000623546 606 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AP003122.6-201ENST00000623831 495 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 MIR3662-201ENST00000637030 95 ntBASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PCDHA3Q9Y5H8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-451P-201ENST00000362921 107 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RNU1-18P-201ENST00000363062 164 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RNU6-641P-201ENST00000384006 107 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RNA5SP118-201ENST00000410385 109 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RPL30P16-201ENST00000419341 429 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 RAC1P6-201ENST00000423911 575 ntBASIC4.13□□□□□ -1.75
PCDHA3Q9Y5H8 MTATP6P4-201ENST00000427725 675 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms