Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BDP1P-201ENST00000582658 1990 ntBASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDHB1Q9Y5F3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-179P-201ENST00000363350 107 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-173P-201ENST00000364215 104 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP130-201ENST00000364431 114 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 SNORA70.4-201ENST00000365509 134 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-76P-201ENST00000384060 104 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC110754.1-201ENST00000399740 601 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AL121834.1-202ENST00000404494 277 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 SDCBPP3-201ENST00000419629 891 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 ATP5JP1-201ENST00000431631 322 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RPS29P7-201ENST00000439662 171 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 MTCYBP18-201ENST00000501056 747 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 OR4H12P-201ENST00000556269 907 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AL161729.3-201ENST00000603533 673 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AC067931.1-201ENST00000624190 671 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 U6.114-201ENST00000636407 96 ntBASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDHB1Q9Y5F3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 Y_RNA.61-201ENST00000362835 102 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-451P-201ENST00000362921 107 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RPL21P65-201ENST00000406094 466 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNU2-41P-201ENST00000410991 178 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MTCO1P39-201ENST00000426148 480 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 HMGB3P30-201ENST00000457863 606 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MRPS17P3-201ENST00000465453 385 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC233702.1-201ENST00000482905 502 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 VN1R105P-201ENST00000486595 910 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 NIPA2P2-201ENST00000496376 1083 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC146944.2-203ENST00000502493 354 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MLLT10P2-201ENST00000506434 249 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC018710.1-201ENST00000506509 158 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 KLHL2P1-201ENST00000508691 521 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC139495.1-202ENST00000513164 354 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC025465.4-201ENST00000513422 638 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-390P-201ENST00000516259 103 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNA5SP519-201ENST00000516480 119 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RNU6-875P-201ENST00000516488 106 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 SNORA31.20-201ENST00000517111 133 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC069240.1-201ENST00000548774 375 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 RN7SL703P-201ENST00000578485 302 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC015917.1-201ENST00000579654 510 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MIR4775-201ENST00000581168 75 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 FGF7P1-201ENST00000582820 288 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC024220.1-201ENST00000603675 484 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC079684.1-201ENST00000621405 437 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC093648.1-201ENST00000623546 606 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC024614.3-201ENST00000637860 256 ntBASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHB1Q9Y5F3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms