Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.2-201ENST00000362330 96 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.288-201ENST00000364854 92 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 RNU6-701P-201ENST00000384059 107 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 SNORA51.8-201ENST00000384234 132 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AL109941.1-201ENST00000401925 229 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 RNU6-603P-201ENST00000411403 107 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC114755.2-201ENST00000413520 361 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 RPS15AP10-201ENST00000432472 382 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 DYNLT3P2-201ENST00000442517 295 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 OSTCP8-201ENST00000445117 448 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AURKAPS2-201ENST00000454983 333 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 snoU109.4-201ENST00000458953 143 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC008571.1-201ENST00000467232 300 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 RPS23P3-201ENST00000470993 430 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC010631.1-201ENST00000474150 156 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC020890.1-201ENST00000491837 504 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 HMGN1P28-201ENST00000521340 364 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC025423.5-201ENST00000550230 219 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 HMGB3P26-201ENST00000560051 582 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 MIR4646-201ENST00000580775 63 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC005899.2-201ENST00000584353 90 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 Z98751.3-201ENST00000604447 521 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC004805.2-201ENST00000605382 482 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 HMGB1P50-201ENST00000605814 607 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC211433.2-201ENST00000608433 387 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AC087385.3-201ENST00000620477 187 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AP001005.3-201ENST00000622049 129 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 AL359893.1-201ENST00000447628 1580 ntBASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.99□□□□□ -1.61
AP4E1Q9UPM8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL645733.1-201ENST00000402250 217 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC096664.2-201ENST00000411843 406 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 COX6B1P1-201ENST00000415962 213 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL591704.1-201ENST00000432574 275 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL589765.3-201ENST00000446084 462 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 RN7SL329P-201ENST00000467740 299 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 HMGB1P25-201ENST00000468402 607 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC087385.1-201ENST00000475062 312 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC114801.2-201ENST00000503825 781 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 RN7SKP40-201ENST00000517211 242 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 SUB1P3-201ENST00000564581 315 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC022726.1-201ENST00000587475 207 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC006254.3-201ENST00000603353 884 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 AC110801.1-201ENST00000623590 212 ntBASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP4E1Q9UPM8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 AC233263.6-201ENST00000631132 1963 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.152-201ENST00000363578 100 ntBASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP4E1Q9UPM8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms