Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC012669.1-201ENST00000603209 283 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP18Q9UMW8 TUG1_1.1-201ENST00000610654 145 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AL121757.2-201ENST00000611223 313 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC130324.3-201ENST00000614165 542 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AP001486.3-201ENST00000615334 372 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC012314.7-201ENST00000619693 93 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AL136221.1-201ENST00000621449 509 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 AC039056.2-201ENST00000622261 511 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 OR4G1P-203ENST00000641984 1631 ntBASIC4.42□□□□□ -1.7
USP18Q9UMW8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP18Q9UMW8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP18Q9UMW8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
USP18Q9UMW8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP18Q9UMW8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC116667.1-201ENST00000604855 2072 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC073343.1-201ENST00000328239 651 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RNU6-332P-201ENST00000391193 108 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AL445584.1-201ENST00000431451 330 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 CKS1BP5-201ENST00000434172 273 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RPL36AP6-201ENST00000435770 321 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RPL23AP89-201ENST00000439324 255 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 RPS29P19-201ENST00000479709 171 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RPS15AP36-201ENST00000492022 382 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC026427.2-201ENST00000506228 536 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RNA5SP519-201ENST00000516480 119 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 HMGN1P28-201ENST00000521340 364 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 IFITM8P-201ENST00000522529 394 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 PSMA2P1-201ENST00000526365 646 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC023050.3-201ENST00000541142 333 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 RPS3AP23-202ENST00000574601 686 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 RN7SL703P-201ENST00000578485 302 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC013553.2-201ENST00000604244 589 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 FAM27D1-201ENST00000612308 341 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC010133.1-201ENST00000615809 842 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 MIR6130-201ENST00000619419 109 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 AC112487.2-201ENST00000637950 304 ntBASIC4.41□□□□□ -1.7
USP18Q9UMW8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP18Q9UMW8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.41□□□□□ -1.7
USP18Q9UMW8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP18Q9UMW8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP18Q9UMW8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP18Q9UMW8 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.4□□□□□ -1.7
USP18Q9UMW8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.4□□□□□ -1.7
USP18Q9UMW8 AC087190.4-201ENST00000574616 8334 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 RNU6-1155P-201ENST00000363554 107 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 RNU6-960P-201ENST00000364056 120 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 SNORD81.2-201ENST00000365153 76 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP18Q9UMW8 Y_RNA.529-201ENST00000384586 119 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 Y_RNA.535-201ENST00000384612 99 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 MIR135A2-201ENST00000384854 100 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 MIR491-201ENST00000384877 84 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AL162578.1-201ENST00000406202 378 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 RNU4-65P-201ENST00000410473 140 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 RNU6-193P-201ENST00000410977 107 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 MTCO3P46-201ENST00000425787 232 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC073587.1-201ENST00000447093 876 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 SNORD97-201ENST00000459187 142 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 RPS27AP13-201ENST00000498403 237 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 RNU4-60P-201ENST00000517239 135 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 SUMO2P20-201ENST00000520803 283 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 SRGNP1-201ENST00000603392 451 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC064801.1-201ENST00000612025 407 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC079684.1-201ENST00000621405 437 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
USP18Q9UMW8 AC100810.6-201ENST00000638068 285 ntBASIC4.4□□□□□ -1.71
USP18Q9UMW8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms