Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 RNU1-39P-201ENST00000383897 165 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 RNY3P10-201ENST00000384764 102 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL591034.1-201ENST00000407447 340 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 MIR1290-201ENST00000408735 78 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC008850.1-201ENST00000427546 362 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 MTND1P28-201ENST00000435623 950 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 MTND4P32-201ENST00000437189 1237 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 ELOCP30-201ENST00000447108 299 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC108059.3-201ENST00000456388 214 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 RPL31P3-201ENST00000458430 332 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 RPL7P15-201ENST00000461190 712 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL049714.1-201ENST00000466686 347 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AL049874.1-201ENST00000489560 388 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC080014.1-201ENST00000496877 1201 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC245166.1-201ENST00000521012 253 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC022878.1-201ENST00000530684 149 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 PIGPP4-201ENST00000584447 307 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC064807.4-201ENST00000607201 407 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC090970.3-201ENST00000612566 866 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC025594.3-201ENST00000613068 790 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC009878.1-201ENST00000621819 340 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AP001148.1-201ENST00000624124 2359 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 AC002546.1-201ENST00000588041 2504 ntBASIC3.58□□□□□ -1.84
LIMA1Q9UHB6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 FGF7P2-201ENST00000332473 296 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 Y_RNA.77-201ENST00000362962 107 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC110754.1-201ENST00000399740 601 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 Y_RNA.598-201ENST00000410480 95 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 CYCSP19-201ENST00000411715 316 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 RPL32P35-201ENST00000415214 394 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC018630.2-202ENST00000422992 927 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 OR2AS1P-201ENST00000427827 319 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 VN1R108P-201ENST00000431580 830 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 TIMM9P1-201ENST00000436122 256 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC122718.1-201ENST00000439448 744 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 MTCO3P45-201ENST00000443036 613 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC008481.1-201ENST00000463278 396 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC002456.2-201ENST00000509356 380 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC091965.2-201ENST00000512324 613 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 APOOP4-201ENST00000513530 597 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC117532.1-201ENST00000514638 323 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 DEFB108A-201ENST00000530110 222 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC005951.2-201ENST00000576282 495 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 MIR3146-201ENST00000580367 79 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AF038458.1-201ENST00000588406 262 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC121334.2-201ENST00000605387 271 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC091903.1-201ENST00000624322 454 ntBASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMA1Q9UHB6 AC099654.13-201ENST00000639774 207 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms