Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR4K7P-201ENST00000580232 945 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS29Q9UBQ0 AC135507.1-201ENST00000607214 561 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AP001033.2-201ENST00000609701 1003 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 AL592148.2-201ENST00000612210 372 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2□□□□□ -2.09
VPS29Q9UBQ0 IGHVIII-44-202ENST00000636235 289 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
VPS29Q9UBQ0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS29Q9UBQ0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 RNU6-115P-201ENST00000364310 107 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 SNORA51.6-201ENST00000384151 125 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 HMGN1P5-201ENST00000448591 263 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 GTF2IP9-201ENST00000502460 301 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC091917.2-201ENST00000505002 744 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC104090.1-201ENST00000506341 1171 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC069306.1-201ENST00000507006 843 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC124293.1-201ENST00000530034 493 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AP001317.1-201ENST00000531194 960 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 TRAV11-201ENST00000539512 339 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AL512310.1-201ENST00000548639 172 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AGGF1P5-201ENST00000567900 919 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC023824.3-201ENST00000569003 562 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC009314.1-201ENST00000603871 304 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 SNORD14A-201ENST00000606526 91 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC005332.10-201ENST00000612725 619 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 OR4G11P-202ENST00000642116 1414 ntBASIC1.99□□□□□ -2.09
VPS29Q9UBQ0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 MIR135A2-201ENST00000384854 100 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 MIR634-201ENST00000385208 97 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 MIR325-201ENST00000385260 98 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL035405.1-201ENST00000400795 710 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 RNU2-43P-201ENST00000410306 190 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 RPS7P9-201ENST00000414704 586 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL135786.1-201ENST00000415892 214 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 SEPT2P1-201ENST00000419651 180 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL590383.1-201ENST00000428602 75 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 EEF1B2P7-201ENST00000451177 676 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 RNU6-717P-201ENST00000459076 104 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC113420.1-201ENST00000507903 571 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 BTF3P12-201ENST00000519620 469 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AC090132.2-201ENST00000615881 347 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL163051.2-201ENST00000618976 735 ntBASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.98□□□□□ -2.09
VPS29Q9UBQ0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 CCT4P2-201ENST00000233836 1548 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 RNU6-796P-201ENST00000391086 107 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 RPS3AP24-201ENST00000407896 734 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 Z85995.1-201ENST00000415547 335 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 SPA17P1-201ENST00000416656 452 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 MTND4LP14-201ENST00000429447 288 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 UBE2V2P3-201ENST00000433562 437 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 MTCO3P11-201ENST00000455103 774 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC098799.1-201ENST00000504752 800 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 SUMO2P6-201ENST00000505273 288 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 RNU5A-7P-201ENST00000515979 116 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 SETP7-201ENST00000552169 453 ntBASIC1.97□□□□□ -2.09
VPS29Q9UBQ0 RPS3AP23-202ENST00000574601 686 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms