Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AGGF1P4-201ENST00000568249 801 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC091805.2-201ENST00000603848 235 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 SNORA62.6-201ENST00000606322 83 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL121772.2-201ENST00000614331 297 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL110115.1-201ENST00000614396 364 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC091834.1-201ENST00000614543 472 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 RNU1-18P-201ENST00000363062 164 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SNORA62.3-201ENST00000365110 153 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL359634.1-202ENST00000404721 284 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 RNU2-16P-201ENST00000410712 136 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC007389.2-201ENST00000434630 306 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL500522.2-201ENST00000448562 343 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC006480.1-201ENST00000449887 378 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 MTCO2P29-201ENST00000465212 189 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 RBM43P1-201ENST00000476891 1081 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 RNU2-10P-201ENST00000516375 211 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 RNU6-430P-201ENST00000517078 107 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC100870.1-201ENST00000522035 505 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC007991.1-201ENST00000522680 631 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL606834.2-201ENST00000602954 668 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL137849.1-201ENST00000604767 169 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AL451064.1-201ENST00000607718 471 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC103710.2-201ENST00000609912 942 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 Z99129.1-201ENST00000612510 255 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC013476.2-201ENST00000614456 459 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 LRRC77P-213ENST00000637727 880 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.56□□□□□ -1.84
HCN3Q9P1Z3 AC008568.2-201ENST00000623862 2313 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 SNORD56.2-201ENST00000363242 71 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 SOD2P1-201ENST00000396543 562 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL591034.1-201ENST00000407447 340 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 U3.42-201ENST00000408746 214 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 RNU2-36P-201ENST00000410361 191 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL356867.1-201ENST00000429623 299 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL358934.1-201ENST00000432346 324 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 snoU13.22-201ENST00000459428 104 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL133162.1-201ENST00000463228 453 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC245014.2-201ENST00000603689 287 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AL161729.4-201ENST00000604650 476 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC246785.4-201ENST00000605374 287 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC099842.1-201ENST00000619919 596 ntBASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN3Q9P1Z3 CR392039.5-201ENST00000623201 510 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms