Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RPL23AP20-201ENST00000447965 421 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 NFU1P2-201ENST00000448700 469 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 HMGB3P30-201ENST00000457863 606 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RPL31P58-201ENST00000469001 379 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 ST13P14-201ENST00000474095 734 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 PPIAP15-201ENST00000479662 484 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC069439.1-201ENST00000494739 167 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC118273.2-201ENST00000532092 465 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 CR383656.7-201ENST00000548164 174 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AL512310.1-201ENST00000548639 172 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC024220.1-201ENST00000603675 484 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC103710.2-201ENST00000609912 942 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC002553.4-201ENST00000616896 331 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 U6.42-201ENST00000618440 107 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC139792.3-201ENST00000623525 224 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 AC244205.2-202ENST00000635781 342 ntBASIC3.93□□□□□ -1.78
USP29Q9HBJ7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.93□□□□□ -1.78
USP29Q9HBJ7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RNU6-867P-201ENST00000364956 107 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RNU6-108P-201ENST00000365558 107 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 MIR7-3-201ENST00000384898 110 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RPS4XP8-201ENST00000402039 771 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RNU4-78P-201ENST00000410940 126 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RPS7P15-201ENST00000415804 584 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 OR1AA1P-201ENST00000419597 916 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC244098.2-201ENST00000422068 99 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 MTCO1P20-201ENST00000425366 358 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RPS15AP9-201ENST00000439856 381 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 HMGN2P21-201ENST00000447764 270 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 UBDP1-202ENST00000457888 382 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AP000926.1-201ENST00000479573 241 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 RNA5SP208-201ENST00000516156 78 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC109635.3-201ENST00000529536 185 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AL512360.1-201ENST00000555346 234 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC025678.1-201ENST00000567861 338 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 COX6CP3-201ENST00000580869 223 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 MIR548S-201ENST00000581352 82 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AP001429.1-201ENST00000602568 530 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC012507.3-201ENST00000603556 477 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC007038.2-201ENST00000608095 740 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AP001596.2-201ENST00000608410 312 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC009161.2-201ENST00000624626 138 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 AC012442.3-202ENST00000636742 206 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 MAPK10-373ENST00000641983 6772 ntBASIC3.92□□□□□ -1.78
USP29Q9HBJ7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP29Q9HBJ7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 OR1S2-201ENST00000302592 978 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RNU6-1078P-201ENST00000364522 103 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RNY3P13-201ENST00000365542 102 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 U1.1-201ENST00000384101 164 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 HSPE1P8-201ENST00000406997 288 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 RNA5SP239-201ENST00000410218 129 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 MTATP6P18-201ENST00000417994 673 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 ELOCP4-201ENST00000420090 333 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.91□□□□□ -1.78
USP29Q9HBJ7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC093156.1-201ENST00000440382 670 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AC010655.1-201ENST00000449336 292 ntBASIC3.91□□□□□ -1.78
USP29Q9HBJ7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms