Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC025263.3-201ENST00000622965 1396 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VCX3BQ9H321 RNU6-1155P-201ENST00000363554 107 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 NDUFB4P4-201ENST00000404822 243 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 RN7SKP158-201ENST00000410453 326 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC107081.1-201ENST00000414975 361 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 NANOGP5-201ENST00000424456 877 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AL009174.1-201ENST00000426577 416 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AL512844.2-201ENST00000433990 593 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC009237.8-201ENST00000445492 379 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 SNORD109B-201ENST00000458961 67 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 SNORD109A-201ENST00000459128 67 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 RNU6-775P-201ENST00000459318 96 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC006499.2-201ENST00000513470 337 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 SNORA31.23-201ENST00000517219 133 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 AL049838.1-201ENST00000563647 981 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC106785.1-201ENST00000565935 262 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.97□□□□□ -2.09
VCX3BQ9H321 MIR4443-201ENST00000585052 53 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AL592148.2-201ENST00000612210 372 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AC073592.7-201ENST00000623659 507 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
VCX3BQ9H321 OR4G2P-202ENST00000641004 1759 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCX3BQ9H321 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 MIR147B-201ENST00000390185 80 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AL024507.1-201ENST00000412741 274 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 Z85995.1-201ENST00000415547 335 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC233981.1-201ENST00000423224 461 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC093106.2-201ENST00000428212 385 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 RAC1P7-201ENST00000445367 377 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 CBWD4P-201ENST00000445695 655 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AL118520.1-201ENST00000450770 291 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 SETP12-201ENST00000514068 805 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 RNU6-751P-201ENST00000516382 101 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC074051.3-201ENST00000570238 358 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.96□□□□□ -2.1
VCX3BQ9H321 AC005229.3-201ENST00000603438 323 ntBASIC1.96□□□□□ -2.1
VCX3BQ9H321 RNU6-234P-201ENST00000365229 104 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 SNORD82-201ENST00000365530 70 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 RNU6-883P-201ENST00000384597 107 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL590383.1-201ENST00000428602 75 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 HMGB1P9-201ENST00000429856 646 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 MTND4LP7-201ENST00000431728 294 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCX3BQ9H321 TAAR7P-201ENST00000436141 242 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL929288.2-201ENST00000446368 407 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 RPL21P134-201ENST00000453468 483 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC108729.2-201ENST00000476543 840 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC107032.1-201ENST00000485945 480 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC091965.2-201ENST00000512324 613 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 RNU6-1282P-201ENST00000516735 96 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC118273.2-201ENST00000532092 465 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC087465.1-201ENST00000560574 245 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC095057.3-201ENST00000567102 1157 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 AC106734.1-201ENST00000568646 663 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 MIR4299-201ENST00000577899 72 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 KATNBL1P1-201ENST00000605192 748 ntBASIC1.95□□□□□ -2.1
VCX3BQ9H321 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCX3BQ9H321 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.95□□□□□ -2.1
VCX3BQ9H321 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR449B-201ENST00000384995 97 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 MIR221-201ENST00000385135 110 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AL356057.1-202ENST00000402263 756 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 SPA17P1-201ENST00000416656 452 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
VCX3BQ9H321 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.94□□□□□ -2.1
VCX3BQ9H321 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms