Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 UBBP3-201ENST00000445497 241 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 CBWD4P-201ENST00000445695 655 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 WASF1P1-201ENST00000447560 1131 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 PDSS1P2-201ENST00000449397 678 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 ZNF886P-201ENST00000450781 723 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 MTND2P24-201ENST00000453434 806 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AP002748.2-201ENST00000528671 348 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC106785.1-201ENST00000565935 262 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 OR4K7P-201ENST00000580232 945 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 MIR4697-201ENST00000582977 78 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC013476.2-201ENST00000614456 459 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC039056.2-201ENST00000622261 511 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AL356863.1-201ENST00000623378 1080 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC004808.1-201ENST00000627671 721 ntBASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SLIRPQ9GZT3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC011477.1-204ENST00000623416 1325 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RNU6-97P-201ENST00000363387 104 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RNU1-105P-201ENST00000363470 161 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 SNORD56.5-201ENST00000364281 72 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RNU6-413P-201ENST00000384115 107 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RNU6-1207P-201ENST00000384343 107 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 FO393413.1-201ENST00000402892 195 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MTATP6P19-201ENST00000413797 659 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AL513477.1-202ENST00000417061 214 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RPL36AP36-201ENST00000418616 301 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AL953862.1-201ENST00000423016 168 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC091390.1-201ENST00000433904 331 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MTCO1P53-201ENST00000441633 699 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 PIGFP3-201ENST00000441918 722 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MTCYBP3-201ENST00000445588 1137 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC007327.1-201ENST00000447461 264 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MTND1P31-201ENST00000449206 961 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC021382.1-201ENST00000483523 359 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 FAM172BP-201ENST00000487497 1089 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC128657.1-201ENST00000549459 145 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 RPL23AP84-201ENST00000571193 464 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AL137843.1-201ENST00000605078 385 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC034102.8-201ENST00000615146 484 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 AC012442.3-202ENST00000636742 206 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 DDX43P2-201ENST00000604753 1354 ntBASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.21□□□□□ -2.06
SLIRPQ9GZT3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RNU6-741P-201ENST00000383889 107 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 SNORA9-201ENST00000384215 133 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 MIR144-201ENST00000384886 86 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 U3.19-201ENST00000390893 196 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RNA5SP354-201ENST00000391247 136 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AL138827.1-201ENST00000402666 306 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RNA5SP21-201ENST00000410917 96 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RNU6-193P-201ENST00000410977 107 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 Y_RNA.625-201ENST00000411256 107 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC098826.1-201ENST00000433943 471 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 Z82210.1-201ENST00000440037 231 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 AC092155.2-201ENST00000454675 477 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 ATG12P2-201ENST00000456830 416 ntBASIC2.2□□□□□ -2.06
SLIRPQ9GZT3 RPS20P20-201ENST00000460498 340 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms