Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC245517.5-201ENST00000611529 162 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
UPF3BQ9BZI7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
UPF3BQ9BZI7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 AL079342.1-201ENST00000401460 267 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AL009174.1-201ENST00000426577 416 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 SDAD1P2-201ENST00000441308 2028 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 RBM43P1-201ENST00000476891 1081 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 AC087272.1-201ENST00000523624 533 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 ZNF705CP-201ENST00000530515 889 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 SNRPGP18-201ENST00000553000 214 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 ISCA1P3-201ENST00000577104 373 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 BNIP3P4-201ENST00000604946 565 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AL391813.2-201ENST00000609113 322 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AC034102.8-201ENST00000615146 484 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.55□□□□□ -2
UPF3BQ9BZI7 AC073569.3-201ENST00000619055 682 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 AC009318.4-201ENST00000620496 486 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
UPF3BQ9BZI7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.54□□□□□ -2
UPF3BQ9BZI7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 TPTE2P4-201ENST00000258589 1605 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 MIR525-201ENST00000384978 85 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 MIR524-201ENST00000385242 87 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 TAS2R15P-201ENST00000390674 928 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AL023807.1-201ENST00000407932 359 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC005005.2-201ENST00000420779 380 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 RPL23AP16-201ENST00000441715 421 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 HMGN1P5-201ENST00000448591 263 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 OR5BM1P-201ENST00000512021 366 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 RNA5SP200-201ENST00000516360 103 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC124293.1-201ENST00000530034 493 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 AP001004.1-201ENST00000582468 324 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AL161629.2-201ENST00000615347 275 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC025588.4-201ENST00000615802 908 ntBASIC2.54□□□□□ -2
UPF3BQ9BZI7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.54□□□□□ -2
UPF3BQ9BZI7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
UPF3BQ9BZI7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.53□□□□□ -2
UPF3BQ9BZI7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC008568.2-201ENST00000623862 2313 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.53□□□□□ -2
UPF3BQ9BZI7 RNA5SP160-201ENST00000364866 120 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.53□□□□□ -2
UPF3BQ9BZI7 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 RNU6-193P-201ENST00000410977 107 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AL590623.1-201ENST00000427864 105 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 AL589880.1-201ENST00000448271 287 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 RPL23AP7-203ENST00000449021 469 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC079804.2-201ENST00000490376 200 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 OR4G11P-201ENST00000492842 939 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 AC068339.2-201ENST00000534395 618 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 MIR4498-201ENST00000577599 66 ntBASIC2.53□□□□□ -2
UPF3BQ9BZI7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
UPF3BQ9BZI7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UPF3BQ9BZI7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 AL024474.1-201ENST00000404655 591 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 RNA5SP338-201ENST00000410495 85 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 RPL7P37-201ENST00000425095 738 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 SDR42E1P3-201ENST00000438345 502 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 MTCO3P2-201ENST00000457365 171 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 RPS15AP34-201ENST00000487776 387 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 AC104090.1-201ENST00000506341 1171 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 ARL2BPP5-201ENST00000523141 481 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 MIR3921-201ENST00000577308 85 ntBASIC2.52□□□□□ -2.01
UPF3BQ9BZI7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.51□□□□□ -2.01
UPF3BQ9BZI7 AC007342.9-201ENST00000623877 1385 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms