Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
PCGF1Q9BSM1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 HSPE1P11-201ENST00000339579 310 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RNY1P12-201ENST00000364251 105 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 U3.42-201ENST00000408746 214 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RPL27AP8-201ENST00000424277 446 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RPL7L1P10-201ENST00000427790 463 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AL358472.1-201ENST00000431295 329 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC122718.1-201ENST00000439448 744 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 FAM133DP-201ENST00000464802 691 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC108078.1-201ENST00000508073 725 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RNU2-10P-201ENST00000516375 211 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 SCARNA24.1-201ENST00000516465 137 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 NRON-201ENST00000517270 370 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC090572.1-201ENST00000519251 160 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 HSPE1P5-201ENST00000561489 272 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 GLUD1P4-201ENST00000590914 418 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC068790.6-201ENST00000602558 258 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC128687.2-201ENST00000609657 566 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 MIR6868-201ENST00000611215 58 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AL110115.1-201ENST00000614396 364 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC090132.2-201ENST00000615881 347 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 BDP1P-201ENST00000582658 1990 ntBASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.32□□□□□ -1.88
PCGF1Q9BSM1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RNU6-181P-201ENST00000363225 107 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 Y_RNA.505-201ENST00000384489 102 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 GSTA9P-201ENST00000406231 611 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RN7SKP140-201ENST00000411196 284 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 MTCO1P21-201ENST00000416634 589 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 OR2AS1P-201ENST00000427827 319 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 MTCO2P11-201ENST00000431069 680 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 FCF1P1-201ENST00000432690 571 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 Z74696.2-201ENST00000436514 498 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC020550.1-201ENST00000447385 163 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 SNORD97-201ENST00000459187 142 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RPL31P60-201ENST00000478450 367 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RNU6-445P-201ENST00000516949 107 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC022968.1-201ENST00000567372 442 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 MIR1254-2-201ENST00000579553 63 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC093227.2-201ENST00000589357 285 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AC013562.2-201ENST00000611632 603 ntBASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.31□□□□□ -1.88
PCGF1Q9BSM1 OR5AK4P-201ENST00000635912 903 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms