Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.94□□□□□ -1.94
SSX3Q99909 HMGB1P14-201ENST00000557424 591 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AL157394.1-201ENST00000562983 1224 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 PCMTD1P2-201ENST00000565017 355 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC145350.1-201ENST00000567426 208 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.94□□□□□ -1.94
SSX3Q99909 AC068135.2-201ENST00000569293 1028 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC010653.1-201ENST00000571108 881 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 RPL23AP84-201ENST00000571193 464 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 MIR3944-201ENST00000581277 108 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC068790.3-201ENST00000602988 553 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 MTCYBP22-201ENST00000603788 447 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC004908.2-201ENST00000609090 574 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 TUG1_2.1-201ENST00000614234 87 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 AC006927.3-201ENST00000638789 384 ntBASIC2.94□□□□□ -1.94
SSX3Q99909 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SSX3Q99909 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC092435.3-201ENST00000565538 3654 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX3Q99909 MIR30E-201ENST00000362104 92 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX3Q99909 RNU5A-2P-201ENST00000384337 116 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 TXNP7-201ENST00000406296 293 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 CCNG1P1-201ENST00000406783 885 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 VPS26BP1-201ENST00000417155 755 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 RPL7P37-201ENST00000425095 738 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX3Q99909 RPL37P21-201ENST00000435890 276 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 LARP1BP3-201ENST00000437229 869 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AL133217.1-201ENST00000450980 425 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX3Q99909 AC068587.2-201ENST00000478386 781 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 RPS15AP36-201ENST00000492022 382 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.93□□□□□ -1.94
SSX3Q99909 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 SCARNA15.2-201ENST00000516409 127 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 RNU6-232P-201ENST00000517144 64 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC007536.1-201ENST00000533382 349 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.93□□□□□ -1.94
SSX3Q99909 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.93□□□□□ -1.94
SSX3Q99909 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 AL355836.1-201ENST00000555951 870 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 AMZ2P1-203ENST00000565833 850 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SSX3Q99909 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 TPMTP1-201ENST00000592307 737 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.93□□□□□ -1.94
SSX3Q99909 BNIP3P22-201ENST00000593399 556 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 ELOCP35-201ENST00000604289 336 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC084757.4-201ENST00000616350 526 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC012314.7-201ENST00000619693 93 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC012150.2-201ENST00000621300 544 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 AC079248.2-201ENST00000623779 326 ntBASIC2.93□□□□□ -1.94
SSX3Q99909 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.92□□□□□ -1.94
SSX3Q99909 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SSX3Q99909 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SSX3Q99909 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX3Q99909 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SSX3Q99909 SNORD9-201ENST00000362566 104 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 Y_RNA.97-201ENST00000363094 102 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 RNU6-501P-201ENST00000364072 100 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 RNU1-39P-201ENST00000383897 165 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 MIR19A-201ENST00000384878 82 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SSX3Q99909 AL109755.1-201ENST00000401791 649 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC093578.1-201ENST00000415219 368 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 HSFY4P-201ENST00000415994 1181 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 AC104332.2-201ENST00000429959 156 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 RPL7P34-201ENST00000433316 712 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC073063.1-201ENST00000434352 607 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC129850.1-201ENST00000436203 508 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 COX6CP2-201ENST00000444980 225 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 DDX3P2-201ENST00000446138 111 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 AC073387.1-201ENST00000453261 709 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 ART2BP-201ENST00000453501 499 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.92□□□□□ -1.94
SSX3Q99909 MTCO1P42-201ENST00000457379 726 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.92□□□□□ -1.94
SSX3Q99909 RPS4XP2-201ENST00000458402 793 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 MTND4LP3-201ENST00000468320 276 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 RPL7P49-201ENST00000471402 708 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 BZW1P2-201ENST00000473537 826 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 RPL30P6-201ENST00000475925 342 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC233702.1-201ENST00000482905 502 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SSX3Q99909 MTND1P22-201ENST00000510572 951 ntBASIC2.92□□□□□ -1.94
SSX3Q99909 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.92□□□□□ -1.94
SSX3Q99909 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms