Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC017037.1-201ENST00000508460 471 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC117522.1-201ENST00000509821 380 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 ARL2BPP6-201ENST00000512757 439 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.64□□□□□ -1.83
NPAS1Q99742 Y_RNA.704-201ENST00000516851 102 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.64□□□□□ -1.83
NPAS1Q99742 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.6-201ENST00000603753 252 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC025449.1-201ENST00000603896 529 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.11-201ENST00000604059 253 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC008162.1-201ENST00000604718 254 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.1-201ENST00000604752 252 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 RBM11P1-201ENST00000604951 799 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.5-201ENST00000605253 252 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.12-201ENST00000605291 253 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.8-201ENST00000605353 252 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL670379.7-201ENST00000605823 252 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AP002360.4-201ENST00000606980 481 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 RNU4-89P-201ENST00000607443 133 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC006023.2-201ENST00000609916 167 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AL731566.2-201ENST00000618971 317 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 AC066616.2-201ENST00000559334 1481 ntBASIC3.64□□□□□ -1.83
NPAS1Q99742 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NPAS1Q99742 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPAS1Q99742 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.64□□□□□ -1.83
NPAS1Q99742 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
NPAS1Q99742 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS1Q99742 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPAS1Q99742 RNU5E-6P-201ENST00000365574 115 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.63□□□□□ -1.83
NPAS1Q99742 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 Y_RNA.453-201ENST00000384223 109 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 Y_RNA.481-201ENST00000384373 102 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AL359634.1-202ENST00000404721 284 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS1Q99742 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS1Q99742 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.63□□□□□ -1.83
NPAS1Q99742 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 USP9YP18-201ENST00000425912 695 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 MED13P1-201ENST00000428342 171 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS1Q99742 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.63□□□□□ -1.83
NPAS1Q99742 RPL7P54-201ENST00000438336 674 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.63□□□□□ -1.83
NPAS1Q99742 FABP5P13-201ENST00000452144 328 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.63□□□□□ -1.83
NPAS1Q99742 AC013267.1-201ENST00000458227 267 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC023598.1-201ENST00000472521 361 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AL132838.2-201ENST00000492041 314 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC011352.1-201ENST00000512300 793 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 RNU6-1092P-201ENST00000516955 87 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AP001804.3-201ENST00000525146 880 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AP003034.1-201ENST00000534621 422 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC022968.1-201ENST00000567372 442 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.63□□□□□ -1.83
NPAS1Q99742 AC007363.1-201ENST00000604736 620 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AL109618.2-201ENST00000605527 211 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AP001596.2-201ENST00000608410 312 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS1Q99742 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS1Q99742 U6.114-201ENST00000636407 96 ntBASIC3.63□□□□□ -1.83
NPAS1Q99742 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.63□□□□□ -1.83
NPAS1Q99742 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
NPAS1Q99742 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPAS1Q99742 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
NPAS1Q99742 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 USP8P1-201ENST00000494673 3183 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.62□□□□□ -1.83
NPAS1Q99742 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPAS1Q99742 Y_RNA.159-201ENST00000363674 87 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 Y_RNA.381-201ENST00000365666 102 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 NDUFS5P1-201ENST00000405668 289 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AL691449.1-201ENST00000426570 421 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.62□□□□□ -1.83
NPAS1Q99742 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.62□□□□□ -1.83
NPAS1Q99742 RPS20P20-201ENST00000460498 340 ntBASIC3.62□□□□□ -1.83
NPAS1Q99742 RPL9P32-201ENST00000464118 620 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms