Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC062022.1-201ENST00000451026 1684 ntBASIC5.91□□□□□ -1.46
PHOX2BQ99453 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
PHOX2BQ99453 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.91□□□□□ -1.46
PHOX2BQ99453 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.9□□□□□ -1.46
PHOX2BQ99453 AL139811.1-201ENST00000424779 2299 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PHOX2BQ99453 LINC01109-201ENST00000603837 3081 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 RNU6-1035P-201ENST00000384477 107 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 MIR1290-201ENST00000408735 78 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.9□□□□□ -1.46
PHOX2BQ99453 DNAJC19P7-201ENST00000428811 344 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AL356867.1-201ENST00000429623 299 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AL590399.4-201ENST00000436561 601 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 Z82188.1-201ENST00000436709 154 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 RPL23AP24-201ENST00000458203 385 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 RPL21P104-201ENST00000464143 478 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 RNU7-200P-201ENST00000516105 62 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 SCARNA15.2-201ENST00000516409 127 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 Y_RNA.679-201ENST00000516416 91 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.9□□□□□ -1.46
PHOX2BQ99453 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.9□□□□□ -1.46
PHOX2BQ99453 MIR3934-201ENST00000579806 107 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AL020997.2-201ENST00000602607 184 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AC093799.2-201ENST00000610062 578 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 AC027309.3-201ENST00000623419 351 ntBASIC5.9□□□□□ -1.46
PHOX2BQ99453 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PHOX2BQ99453 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PHOX2BQ99453 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PHOX2BQ99453 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.9□□□□□ -1.47
PHOX2BQ99453 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PHOX2BQ99453 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PHOX2BQ99453 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC087516.1-201ENST00000561236 2428 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC233981.2-201ENST00000611524 1614 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 RNA5SP319-201ENST00000362768 119 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RNU6-514P-201ENST00000384208 107 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RNU6-102P-201ENST00000384485 104 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 Y_RNA.590-201ENST00000410140 107 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 TMSB10P2-201ENST00000416049 131 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 AL390729.2-201ENST00000416137 156 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 DPPA2P2-201ENST00000418220 897 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RPL17P36-201ENST00000420302 549 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC016027.4-201ENST00000450866 277 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RANP2-201ENST00000456833 229 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC120057.2-201ENST00000571520 271 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 MIR3921-201ENST00000577308 85 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 RMST_6.1-201ENST00000611980 203 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AL359693.1-201ENST00000614959 2407 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
PHOX2BQ99453 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 AC092070.2-203ENST00000598377 3644 ntBASIC5.89□□□□□ -1.47
PHOX2BQ99453 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PHOX2BQ99453 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHOX2BQ99453 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 OR4G2P-202ENST00000641004 1759 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHOX2BQ99453 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC099654.2-201ENST00000433031 1980 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 AL731532.2-201ENST00000623542 1953 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PHOX2BQ99453 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PHOX2BQ99453 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PHOX2BQ99453 SNORA25.1-201ENST00000362326 128 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 Y_RNA.240-201ENST00000364469 95 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 SNORA40C-201ENST00000391285 128 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC016739.1-201ENST00000405359 345 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 RNU2-61P-201ENST00000411069 191 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC099677.3-201ENST00000427081 395 ntBASIC5.88□□□□□ -1.47
PHOX2BQ99453 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms