Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC096632.1-201ENST00000427395 310 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 PHBP16-201ENST00000446318 950 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC116533.1-201ENST00000459748 321 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 RPL23AP41-201ENST00000484754 458 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 DEFB109F-201ENST00000491870 277 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC021146.2-201ENST00000504736 556 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC005741.1-201ENST00000511094 432 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC114797.1-201ENST00000514003 728 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC104057.1-201ENST00000515547 497 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 RNU4-29P-201ENST00000515943 174 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 RNU6-559P-201ENST00000516151 98 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 SNORD27.1-201ENST00000516319 72 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 SNORA31.9-201ENST00000516429 84 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 SNORA25.17-201ENST00000517184 124 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC090151.1-201ENST00000520784 730 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AP000907.2-201ENST00000530827 353 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC092470.1-201ENST00000546187 132 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC080078.3-201ENST00000605407 463 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL080274.1-201ENST00000605565 220 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC124303.1-201ENST00000605703 360 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL627309.6-201ENST00000606857 840 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC091979.2-201ENST00000607514 214 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 7SK.10-201ENST00000621414 298 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC079597.1-201ENST00000624306 508 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 AC006971.1-201ENST00000407916 4486 ntBASIC3.64□□□□□ -1.83
ZNF48Q96MX3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.64□□□□□ -1.83
ZNF48Q96MX3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL133383.2-201ENST00000622958 2336 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RNU1-108P-201ENST00000362556 161 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RNU1-20P-201ENST00000363314 162 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.133-201ENST00000363428 110 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RNU4-48P-201ENST00000365559 182 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.445-201ENST00000384168 102 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL583835.1-201ENST00000399570 407 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL138878.1-201ENST00000405131 347 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RPL31P2-201ENST00000413849 377 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC137499.1-201ENST00000427602 88 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RPL21P91-201ENST00000429231 479 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC011998.1-201ENST00000433403 117 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RPL23AP43-201ENST00000446445 471 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AL590639.1-201ENST00000456484 337 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC006512.1-201ENST00000468816 291 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RN7SL817P-201ENST00000480777 288 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC078918.1-201ENST00000498515 228 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 RNA5SP446-201ENST00000515955 82 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 NARSP2-201ENST00000518524 679 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.63□□□□□ -1.83
ZNF48Q96MX3 MRPL49P2-201ENST00000521066 465 ntBASIC3.63□□□□□ -1.83
ZNF48Q96MX3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms