Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC020633.1-201ENST00000468439 2247 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AL031595.2-201ENST00000624215 19071 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 RNU6-1035P-201ENST00000384477 107 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AL590290.1-201ENST00000405336 380 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 RN7SKP114-201ENST00000410327 279 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 RNU2-52P-201ENST00000410680 190 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 DPPA2P2-201ENST00000418220 897 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 ZNF33CP-201ENST00000432492 2030 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AL645568.3-201ENST00000433683 316 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AC006967.1-201ENST00000467608 589 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AC084198.1-201ENST00000477747 402 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 COX6B1P5-201ENST00000509843 249 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 RNU6-911P-201ENST00000516523 104 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 Y_RNA.687-201ENST00000516558 91 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 MIR4300-201ENST00000581016 96 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 MIR3667-201ENST00000581025 74 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AC009570.1-201ENST00000609599 745 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 MTND1P7-201ENST00000632801 297 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 MAPK10-328ENST00000641553 4009 ntBASIC5.95□□□□□ -1.46
TRIM47Q96LD4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM47Q96LD4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 RNU6-188P-201ENST00000364207 107 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC017079.2-201ENST00000416102 485 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC069213.2-201ENST00000420238 366 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC093414.1-201ENST00000434712 514 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 RPL10P17-201ENST00000453852 316 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 snoU13.1-201ENST00000459157 104 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC090602.1-201ENST00000469695 252 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AP000893.1-201ENST00000474462 794 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC027288.2-201ENST00000553028 243 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 PSMA6P4-201ENST00000603247 718 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC006254.2-201ENST00000603259 279 ntBASIC5.94□□□□□ -1.46
TRIM47Q96LD4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.94□□□□□ -1.46
TRIM47Q96LD4 AC125336.1-201ENST00000508893 2827 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AC103710.2-202ENST00000641454 2853 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AC026523.2-201ENST00000625039 7739 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RNU6-97P-201ENST00000363387 104 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RNA5SP90-201ENST00000364801 99 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 SNORD116-18-201ENST00000383961 92 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RNA5SP332-201ENST00000391063 115 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 SNORA48.4-201ENST00000391089 134 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AC016769.3-201ENST00000396562 315 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RNU6-174P-201ENST00000410406 106 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RNU6-387P-201ENST00000411331 105 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 RPL17P36-201ENST00000420302 549 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AC092436.3-201ENST00000511788 257 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 AC098976.1-201ENST00000513014 541 ntBASIC5.93□□□□□ -1.46
TRIM47Q96LD4 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms