Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 Y_RNA.453-201ENST00000384223 109 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 PTMAP5-201ENST00000393073 333 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 RPS12P23-201ENST00000419579 400 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 MTCO2P5-201ENST00000422621 426 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 PSMA2P3-201ENST00000429685 675 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 ARPC3P1-201ENST00000437218 533 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 RPS3AP12-201ENST00000443616 753 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 RPS20P32-201ENST00000456044 356 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 U3.44-201ENST00000458938 192 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 RPL31P58-201ENST00000469001 379 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC087312.1-201ENST00000471411 480 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 HMGB1P29-201ENST00000505659 499 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC074250.1-201ENST00000511117 192 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC105914.1-201ENST00000511798 226 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 HIGD1AP3-201ENST00000515857 278 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC118273.2-201ENST00000532092 465 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 OR5B10P-201ENST00000532869 642 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC034268.2-201ENST00000571784 482 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 MIR3118-1-201ENST00000581787 76 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC006504.3-201ENST00000586818 523 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC006116.10-201ENST00000591836 581 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC025588.3-201ENST00000604182 274 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC104458.1-201ENST00000608243 463 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AL355472.4-201ENST00000610233 626 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 MIR7975-201ENST00000619350 68 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC092794.2-201ENST00000620933 563 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 AC099654.14-201ENST00000638599 341 ntBASIC3.55□□□□□ -1.84
RTP4Q96DX8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RTP4Q96DX8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTP4Q96DX8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTP4Q96DX8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTP4Q96DX8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTP4Q96DX8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTP4Q96DX8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTP4Q96DX8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNU6-28P-201ENST00000362378 107 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNY4P14-201ENST00000363656 96 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNU4-1-201ENST00000363925 141 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 SNORD82-201ENST00000365530 70 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNU6-1279P-201ENST00000383917 103 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNU6-730P-201ENST00000383954 104 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 MTND3P17-201ENST00000416968 344 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 MTATP6P27-201ENST00000416987 621 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 PIGFP2-201ENST00000421400 651 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AL353193.1-201ENST00000421444 268 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AC092832.1-201ENST00000422934 400 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 FCF1P1-201ENST00000432690 571 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AL159987.2-201ENST00000432754 307 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 BX679664.1-201ENST00000434429 253 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 RPL21P23-201ENST00000446654 460 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 DPPA3P1-201ENST00000448050 469 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 AC006539.3-201ENST00000454258 129 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AL359385.1-201ENST00000456509 365 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RPL7P47-201ENST00000497299 556 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 RNU6-201P-201ENST00000517100 61 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AC107934.1-201ENST00000522215 217 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 OR8L1P-201ENST00000534005 955 ntBASIC3.54□□□□□ -1.84
RTP4Q96DX8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.54□□□□□ -1.84
RTP4Q96DX8 HMGB1P33-201ENST00000563485 527 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms