Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC093012.1-202ENST00000549403 582 ntBASIC4.28□□□□□ -1.72
HPS3Q969F9 OR4H12P-201ENST00000556269 907 ntBASIC4.28□□□□□ -1.72
HPS3Q969F9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.28□□□□□ -1.72
HPS3Q969F9 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
HPS3Q969F9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.28□□□□□ -1.72
HPS3Q969F9 AC006270.2-201ENST00000578523 652 ntBASIC4.28□□□□□ -1.72
HPS3Q969F9 AC017083.3-201ENST00000609955 700 ntBASIC4.28□□□□□ -1.72
HPS3Q969F9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
HPS3Q969F9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
HPS3Q969F9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HPS3Q969F9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.28□□□□□ -1.73
HPS3Q969F9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
HPS3Q969F9 GABPAP-201ENST00000419271 1356 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 BDP1P-201ENST00000582658 1990 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.27□□□□□ -1.73
HPS3Q969F9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS3Q969F9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS3Q969F9 RNU6-1120P-201ENST00000362988 108 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 RNU4-12P-201ENST00000365233 139 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 RNU6-213P-201ENST00000384051 104 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 SOD2P1-201ENST00000396543 562 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC110754.1-201ENST00000399740 601 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 CALM2P3-201ENST00000400429 449 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 PPIAP31-201ENST00000405422 495 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 SNORA71B-202ENST00000439232 272 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AL356535.1-201ENST00000440335 398 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 SNRPGP6-201ENST00000451124 220 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC013267.1-201ENST00000458227 267 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 RPL31P13-201ENST00000484151 370 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 GMPSP1-201ENST00000514075 579 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 SCARNA24.1-201ENST00000516465 137 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 SCARNA14-201ENST00000516903 136 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AC022695.1-201ENST00000522089 237 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AP004242.1-201ENST00000533701 349 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AL359212.1-201ENST00000556608 614 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.27□□□□□ -1.73
HPS3Q969F9 MIR4644-201ENST00000579929 84 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AL391646.1-201ENST00000603860 190 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC245389.1-201ENST00000605141 529 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AC092954.2-201ENST00000609103 430 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC068944.2-201ENST00000610373 403 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 AC139792.3-201ENST00000623525 224 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC110801.1-201ENST00000623590 212 ntBASIC4.27□□□□□ -1.73
HPS3Q969F9 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.27□□□□□ -1.73
HPS3Q969F9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS3Q969F9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HPS3Q969F9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.27□□□□□ -1.73
HPS3Q969F9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS3Q969F9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HPS3Q969F9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS3Q969F9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HPS3Q969F9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HPS3Q969F9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS3Q969F9 AC073343.1-201ENST00000328239 651 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HPS3Q969F9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HPS3Q969F9 MIR558-201ENST00000384920 94 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 CIR1P3-201ENST00000405137 479 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS3Q969F9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 OR2AS1P-201ENST00000427827 319 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 MED13P1-201ENST00000428342 171 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 RPS20P5-201ENST00000434808 360 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 SNORA84-201ENST00000459229 133 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC010631.1-201ENST00000474150 156 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 TRBV12-2-201ENST00000489763 344 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AP002812.1-201ENST00000495378 474 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC019235.1-201ENST00000503847 207 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.26□□□□□ -1.73
HPS3Q969F9 AC105914.1-201ENST00000511798 226 ntBASIC4.26□□□□□ -1.73
HPS3Q969F9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.26□□□□□ -1.73
HPS3Q969F9 RNU6-718P-201ENST00000516166 105 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms