Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC009268.2-201ENST00000621925 457 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC007494.3-201ENST00000624660 743 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC068724.3-201ENST00000625906 87 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AC012321.1-201ENST00000561622 1588 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC63Q8NA47 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.16□□□□□ -1.9
CCDC63Q8NA47 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
CCDC63Q8NA47 AL445523.1-201ENST00000451184 1362 ntBASIC3.15□□□□□ -1.9
CCDC63Q8NA47 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 CCNG1P1-201ENST00000406783 885 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC078974.1-201ENST00000411597 223 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 MTND1P21-201ENST00000412991 285 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 Z99497.1-201ENST00000421282 135 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 USP9YP36-201ENST00000424581 829 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 RPL37P21-201ENST00000435890 276 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC092641.1-201ENST00000440229 772 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 KATNBL1P6-201ENST00000453433 915 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AP1S2P1-201ENST00000457344 379 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 MTND3P7-201ENST00000474435 343 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC006499.5-201ENST00000505037 514 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC106038.2-201ENST00000520706 568 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 ROCK1P1-201ENST00000573767 549 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 ZNF415P1-201ENST00000582279 1166 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL022161.1-201ENST00000604390 213 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AL355472.4-201ENST00000610233 626 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC024941.1-201ENST00000612250 334 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC107871.2-201ENST00000612894 502 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 uc_338.25-201ENST00000613756 156 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC002076.2-201ENST00000617362 122 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 AC090617.7-201ENST00000623952 126 ntBASIC3.15□□□□□ -1.91
CCDC63Q8NA47 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC63Q8NA47 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 Y_RNA.46-201ENST00000362695 102 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 SNORA36C-201ENST00000384289 132 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 MIR19A-201ENST00000384878 82 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 RNU6-754P-201ENST00000391166 107 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 RN7SKP159-201ENST00000410657 292 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 CYCSP19-201ENST00000411715 316 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL389915.1-201ENST00000422463 466 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 RPL27AP8-201ENST00000424277 446 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC055855.1-201ENST00000489563 579 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC135721.1-201ENST00000497954 479 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 VN1R104P-201ENST00000505115 1009 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 RNU6-1003P-201ENST00000517099 105 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 MTND2P38-201ENST00000522536 667 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 FAM60DP-201ENST00000524174 632 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 DEFB108D-201ENST00000527787 222 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC083760.1-201ENST00000589621 670 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL357094.1-201ENST00000603845 844 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL136295.6-201ENST00000610486 658 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC104010.1-201ENST00000616889 150 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL034408.1-202ENST00000636088 415 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL392088.2-201ENST00000637607 285 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 AL138713.1-201ENST00000624026 2130 ntBASIC3.14□□□□□ -1.91
CCDC63Q8NA47 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CCDC63Q8NA47 GABRG2-229ENST00000641017 3628 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 CUL1P1-201ENST00000509510 2425 ntBASIC3.13□□□□□ -1.91
CCDC63Q8NA47 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms