Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 MIR448-201ENST00000362131 111 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP258-201ENST00000362750 119 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.67-201ENST00000362870 100 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.255-201ENST00000364581 97 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 RPL35AP12-201ENST00000425362 338 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 HMGN2P31-201ENST00000432430 273 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 ATP5HP2-201ENST00000433885 485 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC108734.1-201ENST00000439549 399 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC069285.2-201ENST00000440210 275 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 PRDX3P3-201ENST00000447765 522 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC073415.1-201ENST00000449240 153 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 HMGB1P15-201ENST00000453854 435 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 PLGLA-201ENST00000465668 449 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 FTH1P24-201ENST00000503502 462 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC093767.1-201ENST00000504523 156 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.691-201ENST00000516611 103 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-1314P-201ENST00000517139 104 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AP000907.2-201ENST00000530827 353 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC063950.1-201ENST00000552036 308 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 MIR4504-201ENST00000577413 92 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC105224.1-201ENST00000587055 421 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC098848.2-201ENST00000588023 330 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AL354950.2-201ENST00000617939 290 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 RMST_7.1-201ENST00000621935 268 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC011978.2-201ENST00000569835 2054 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 OR4G1P-203ENST00000641984 1631 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SLC44A3Q8N4M1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP004289.2-201ENST00000444413 1457 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL118496.1-201ENST00000440201 1812 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC032011.1-201ENST00000611703 1549 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC009902.3-201ENST00000606235 2172 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.22-201ENST00000362492 102 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 Y_RNA.367-201ENST00000365544 101 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 MIR514A2-201ENST00000385131 88 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 MIR514A3-201ENST00000385132 88 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC069218.2-201ENST00000411665 344 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC004987.3-201ENST00000413879 771 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 MTCO2P12-201ENST00000427426 682 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 EZH2P1-201ENST00000431167 291 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC024082.2-201ENST00000434771 238 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 DDX3P2-201ENST00000446138 111 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 RPL36AP13-201ENST00000457490 317 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP001992.1-205ENST00000462248 379 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC026427.2-201ENST00000506228 536 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC022690.1-201ENST00000526681 550 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 OR4R1P-201ENST00000529879 463 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 RPL23AP87-202ENST00000573039 466 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC243960.4-201ENST00000600532 288 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC010591.1-201ENST00000603941 649 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL162730.1-201ENST00000605734 292 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL133255.1-201ENST00000606374 441 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AL365204.3-201ENST00000612448 685 ntBASIC4.12□□□□□ -1.75
SLC44A3Q8N4M1 AC005344.1-201ENST00000613391 459 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms