Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AL136372.1-201ENST00000403060 228 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RPL21P66-201ENST00000426566 466 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC104850.1-201ENST00000435940 476 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AL162389.1-201ENST00000449233 177 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RPS15AP36-201ENST00000492022 382 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 RPL37P25-201ENST00000507308 276 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 SUMO2P20-201ENST00000520803 283 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 SNRPGP16-201ENST00000533275 226 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC010546.1-201ENST00000569391 485 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AL391840.1-201ENST00000571144 367 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AL357559.1-201ENST00000622228 274 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 MTCO1P12-201ENST00000414273 1543 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
BEST3Q8N1M1 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.38□□□□□ -1.87
BEST3Q8N1M1 CEP170P1-201ENST00000502249 4587 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 PRO1804-201ENST00000623780 2050 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 OR1S2-201ENST00000302592 978 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 RNU6-76P-201ENST00000384060 104 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 HSPE1P8-201ENST00000406997 288 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 UBE2FP1-201ENST00000416536 447 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 MTND3P17-201ENST00000416968 344 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 USP9YP36-201ENST00000424581 829 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 MTATP6P4-201ENST00000427725 675 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC024082.2-201ENST00000434771 238 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL359385.1-201ENST00000456509 365 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 SNORD105B-201ENST00000458770 79 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 RBM43P1-201ENST00000476891 1081 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC091133.4-201ENST00000511142 308 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 RNA5SP337-201ENST00000517007 109 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC011979.2-201ENST00000527568 352 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 OR5B10P-201ENST00000532869 642 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 SRGNP1-201ENST00000603392 451 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 BRDTP1-201ENST00000605735 677 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC004067.1-201ENST00000608733 700 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AL732618.1-201ENST00000623251 301 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 MTND5P26-201ENST00000426018 1752 ntBASIC3.37□□□□□ -1.87
BEST3Q8N1M1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
BEST3Q8N1M1 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 Y_RNA.3-201ENST00000362331 103 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 RNY1P12-201ENST00000364251 105 ntBASIC3.36□□□□□ -1.87
BEST3Q8N1M1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BEST3Q8N1M1 MIR183-201ENST00000384958 110 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms