Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.37□□□□□ -1.87
APLFQ8IW19 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APLFQ8IW19 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.37□□□□□ -1.87
APLFQ8IW19 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APLFQ8IW19 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.36□□□□□ -1.87
APLFQ8IW19 Y_RNA.111-201ENST00000363248 100 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 Y_RNA.516-201ENST00000384541 124 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 MIR1305-201ENST00000408300 86 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.36□□□□□ -1.87
APLFQ8IW19 SAGE2P-201ENST00000420011 2126 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AL035410.1-201ENST00000427409 427 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 MTND1P4-201ENST00000435196 415 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 RSU1P2-202ENST00000437884 485 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AL031667.1-201ENST00000440222 725 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC010655.1-201ENST00000449336 292 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 USP9YP34-201ENST00000453983 808 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 SNORD42A-201ENST00000459584 64 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC008155.2-201ENST00000464337 397 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 KLF3P2-201ENST00000465138 268 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC096751.1-202ENST00000502691 1067 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 RNF138P1-201ENST00000502765 546 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC107401.1-201ENST00000503426 685 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC093767.1-201ENST00000504523 156 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC022447.3-201ENST00000506865 495 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC016065.2-201ENST00000514530 444 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 RN7SKP298-201ENST00000515950 94 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.36□□□□□ -1.87
APLFQ8IW19 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.36□□□□□ -1.87
APLFQ8IW19 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC011611.1-201ENST00000552179 197 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.36□□□□□ -1.87
APLFQ8IW19 MIR4528-201ENST00000577763 90 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 MIR4307-201ENST00000582802 84 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.36□□□□□ -1.87
APLFQ8IW19 BNIP3P8-201ENST00000597863 560 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC078899.3-201ENST00000599065 212 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AL603839.4-201ENST00000624658 1005 ntBASIC3.36□□□□□ -1.87
APLFQ8IW19 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
APLFQ8IW19 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APLFQ8IW19 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
APLFQ8IW19 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.36□□□□□ -1.87
APLFQ8IW19 AC011978.2-201ENST00000569835 2054 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APLFQ8IW19 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.35□□□□□ -1.87
APLFQ8IW19 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AL356274.2-201ENST00000624379 3752 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 RNU6-343P-201ENST00000364709 104 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 RNU6-533P-201ENST00000384144 107 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 RNU6-769P-201ENST00000384407 104 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 U3.19-201ENST00000390893 196 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 SNORA26.7-201ENST00000391288 122 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 U3.39-201ENST00000408569 239 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.35□□□□□ -1.87
APLFQ8IW19 USP9YP13-201ENST00000417797 480 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 ATP5JP1-201ENST00000431631 322 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AC109583.1-201ENST00000432156 268 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 HSPE1P28-201ENST00000443139 211 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APLFQ8IW19 HMGN2P21-201ENST00000447764 270 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AC005297.2-201ENST00000450430 606 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AL590365.1-201ENST00000450788 243 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AL590639.1-201ENST00000456484 337 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 BTF3P5-201ENST00000457252 467 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 RN7SL75P-201ENST00000461926 281 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 RPL21P10-201ENST00000463521 490 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC084357.1-201ENST00000473404 255 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 HMGB1P36-201ENST00000487709 576 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.35□□□□□ -1.87
APLFQ8IW19 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.35□□□□□ -1.87
APLFQ8IW19 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.35□□□□□ -1.87
APLFQ8IW19 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
APLFQ8IW19 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.35□□□□□ -1.87
APLFQ8IW19 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.35□□□□□ -1.87
APLFQ8IW19 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APLFQ8IW19 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms