Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
C9orf139Q6ZV77 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 CBX3P1-201ENST00000325243 554 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 SNORA31-201ENST00000362607 130 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 SNORD56.2-201ENST00000363242 71 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 RNU5E-8P-201ENST00000363502 116 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 RNU6-263P-201ENST00000363811 107 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 SNORA69-201ENST00000383895 132 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MIR200C-201ENST00000384980 68 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MIR93-201ENST00000385024 80 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 OR9R1P-201ENST00000412200 877 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC092447.6-201ENST00000414578 210 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 SNRPEP10-201ENST00000420249 274 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC244098.2-201ENST00000422068 99 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL451062.2-201ENST00000427515 271 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC137499.1-201ENST00000427602 88 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL445584.1-201ENST00000431451 330 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL138799.3-201ENST00000438968 350 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 BNIP3P2-201ENST00000441221 577 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL500522.2-201ENST00000448562 343 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 RPS17P13-201ENST00000448974 407 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 RPS11P1-201ENST00000451072 473 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC092001.1-201ENST00000453012 261 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 UBDP1-202ENST00000457888 382 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 snoU109.4-201ENST00000458953 143 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AP000852.1-201ENST00000472460 573 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC078918.1-201ENST00000498515 228 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 HMGN1P12-201ENST00000499125 195 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MTCO2P30-201ENST00000503662 364 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 SNORA40.12-201ENST00000516329 111 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AP003385.6-201ENST00000531603 374 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL133271.1-201ENST00000538229 291 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC135001.1-201ENST00000544546 283 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC007424.1-203ENST00000554613 687 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 FGF7P1-201ENST00000582820 288 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AL669831.4-202ENST00000590817 238 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 GLUD1P4-201ENST00000590914 418 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC008638.3-201ENST00000603341 463 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC103858.2-201ENST00000621471 543 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 AC024940.5-201ENST00000622889 474 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 CKAP2P1-201ENST00000555477 2049 ntBASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
C9orf139Q6ZV77 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.89
C9orf139Q6ZV77 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL157700.1-201ENST00000561973 1432 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.22-201ENST00000362492 102 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SNORD35B-201ENST00000363660 87 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 SNORD74.4-201ENST00000364129 80 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP97-201ENST00000365006 84 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNU6-821P-201ENST00000390995 107 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP171-201ENST00000391071 115 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL590704.1-201ENST00000402856 794 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL591416.1-201ENST00000404015 867 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MIR1251-201ENST00000408552 70 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 RN7SKP156-201ENST00000410308 342 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MTCO3P12-201ENST00000416718 547 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 TBCAP1-201ENST00000436520 327 ntBASIC3.21□□□□□ -1.9
C9orf139Q6ZV77 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms