Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC138915.1-201ENST00000565427 1685 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 RPS12P24-201ENST00000412619 387 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 RPL35AP22-201ENST00000436855 335 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 OR10R1P-201ENST00000441524 1141 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC146507.1-201ENST00000468335 354 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 MTATP6P22-201ENST00000507369 598 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 IGKV2D-36-201ENST00000518643 226 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC013553.2-201ENST00000604244 589 ntBASIC1.69□□□□□ -2.14
UBR3Q6ZT12 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
UBR3Q6ZT12 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 Z82195.2-201ENST00000612348 18351 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 AL445183.3-201ENST00000414168 502 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 HMGN2P16-201ENST00000456802 261 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 RNU1-61P-201ENST00000516107 151 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 SNORD84-203ENST00000584275 78 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 AC022079.2-201ENST00000619739 566 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 MIR203B-201ENST00000636080 86 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 ZNF734P-201ENST00000419494 1534 ntBASIC1.68□□□□□ -2.14
UBR3Q6ZT12 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
UBR3Q6ZT12 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 RNY1-201ENST00000364228 113 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 RNU6-342P-201ENST00000384521 104 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 KATNBL1P3-201ENST00000443475 909 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AP002345.1-201ENST00000456493 928 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AP003033.1-201ENST00000527244 415 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 MIR6788-201ENST00000618842 66 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 uc_338.20-201ENST00000621563 178 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AP000560.1-201ENST00000624150 1937 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 DEFB109C-201ENST00000382575 264 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 DEFB109B-201ENST00000382656 264 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AL589994.1-201ENST00000404962 340 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 HMGN2P30-201ENST00000423237 256 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC093281.2-201ENST00000510153 597 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC083806.3-201ENST00000614016 455 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC006065.5-201ENST00000623427 349 ntBASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.67□□□□□ -2.14
UBR3Q6ZT12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 MIR548J-201ENST00000408833 112 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AL512661.1-201ENST00000434586 1253 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 UBE2V1P13-201ENST00000436983 439 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AL353898.1-201ENST00000444055 238 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AC010627.1-201ENST00000503819 1294 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 RPPH1-2P-201ENST00000516688 293 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AC084364.2-201ENST00000546924 395 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AC125611.2-201ENST00000551907 647 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 CDC27P3-201ENST00000635418 1910 ntBASIC1.66□□□□□ -2.14
UBR3Q6ZT12 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.66□□□□□ -2.14
UBR3Q6ZT12 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 SNORA7.2-201ENST00000364446 145 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 MIR153-1-201ENST00000384914 90 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 SRIP3-201ENST00000413200 219 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 MTCYBP7-201ENST00000419540 1134 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AL445669.1-201ENST00000426743 755 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 MRPL42P6-201ENST00000486397 371 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AC016957.1-201ENST00000534895 309 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.65□□□□□ -2.14
UBR3Q6ZT12 AL133507.1-201ENST00000605269 557 ntBASIC1.65□□□□□ -2.14
UBR3Q6ZT12 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR3Q6ZT12 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
UBR3Q6ZT12 AL354685.2-201ENST00000448218 1447 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.65□□□□□ -2.15
UBR3Q6ZT12 SNORA67.1-201ENST00000364749 141 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UBR3Q6ZT12 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 SNORA40.6-201ENST00000391153 128 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 RPL26P37-201ENST00000411983 438 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 TRGV6-201ENST00000417928 299 ntBASIC1.65□□□□□ -2.15
UBR3Q6ZT12 MORF4L1P7-201ENST00000426038 703 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms