Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNKSR3Q6P9H4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-1252P-201ENST00000363054 104 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 Y_RNA.135-201ENST00000363439 95 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-379P-201ENST00000363813 104 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP175-201ENST00000364275 119 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RPL21P65-201ENST00000406094 466 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP36-201ENST00000410197 133 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RN7SKP235-201ENST00000410662 305 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RPS20P14-201ENST00000412545 360 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 SKA2P1-201ENST00000425592 390 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC020550.1-201ENST00000447385 163 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC104308.1-201ENST00000454621 333 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 VN1R105P-201ENST00000486595 910 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 TXNP6-201ENST00000510190 310 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNU6-976P-201ENST00000516086 111 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 RNA5SP143-201ENST00000516936 115 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC109635.4-202ENST00000531666 412 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AP000857.1-201ENST00000532151 543 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AL359219.2-201ENST00000555184 348 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 MIR4790-201ENST00000577799 79 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 MIR5690-201ENST00000583739 73 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AL592436.1-201ENST00000605135 558 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC007485.1-201ENST00000616755 206 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 uc_338.11-201ENST00000619132 160 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC112200.1-201ENST00000625015 234 ntBASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.72□□□□□ -1.65
CNKSR3Q6P9H4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CNKSR3Q6P9H4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.71□□□□□ -1.65
CNKSR3Q6P9H4 NXPH1-205ENST00000602349 1953 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 SNORA62.1-201ENST00000364287 154 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 SNORD3H-201ENST00000384486 214 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 ENSAP1-201ENST00000392855 326 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL669831.1-202ENST00000428504 417 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 TIMM9P1-201ENST00000436122 256 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL358232.1-201ENST00000448030 501 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 BX276092.4-201ENST00000452056 248 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 MTND1P9-201ENST00000453775 944 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC087385.1-201ENST00000475062 312 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC126389.1-201ENST00000477436 290 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC107222.1-201ENST00000510899 637 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC026801.2-201ENST00000515352 425 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 RN7SKP277-201ENST00000516895 283 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 RNA5SP454-201ENST00000517231 127 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AP005902.1-201ENST00000521358 186 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AP002404.1-201ENST00000532005 451 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 LSM3P2-201ENST00000551246 273 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC010653.1-201ENST00000571108 881 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 MIR4458-201ENST00000578872 75 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 MIR4660-201ENST00000583549 74 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC091178.1-203ENST00000584586 279 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC007566.2-201ENST00000603642 413 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL354984.3-201ENST00000604803 325 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AC103710.2-201ENST00000609912 942 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 FAM157A-202ENST00000615155 405 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL021997.2-201ENST00000615674 271 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 AL162373.1-201ENST00000620433 407 ntBASIC4.71□□□□□ -1.66
CNKSR3Q6P9H4 MIR6075-201ENST00000620782 95 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms