Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.75-201ENST00000362927 97 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-653P-201ENST00000363074 106 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 U3.7-201ENST00000363668 216 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-270P-201ENST00000364131 105 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MIR1286-201ENST00000408112 78 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MIR1302-4-201ENST00000408701 150 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RPS15AP40-201ENST00000419621 391 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 CYCSP12-201ENST00000437729 300 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1211P-201ENST00000459179 105 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RPS23P2-201ENST00000463671 415 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RPS26P21-201ENST00000475397 348 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RN7SL583P-201ENST00000475692 287 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 RN7SL727P-201ENST00000482164 296 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MIR548AC-201ENST00000585049 88 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AP000787.2-201ENST00000604432 568 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC123912.5-201ENST00000605470 343 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC023043.4-201ENST00000612081 449 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC093671.1-201ENST00000624981 2929 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AP002512.4-202ENST00000641599 4530 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 AC144833.1-201ENST00000567953 4089 ntBASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNFT1Q5M7Z0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 PABPC1P6-201ENST00000445594 1829 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 Y_RNA.7-201ENST00000362352 102 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-429P-201ENST00000384582 108 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-239P-201ENST00000390990 99 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 SPTLC1P2-201ENST00000407089 121 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 RNU6-1064P-201ENST00000410626 104 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 RPS27AP9-201ENST00000477681 438 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 VN1R105P-201ENST00000486595 910 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC020890.1-201ENST00000491837 504 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC115990.1-201ENST00000526957 301 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC012616.1-201ENST00000600294 197 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 AC008568.2-201ENST00000623862 2313 ntBASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RNFT1Q5M7Z0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RNFT1Q5M7Z0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
RNFT1Q5M7Z0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
RNFT1Q5M7Z0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms