Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 H2AFZP6-201ENST00000444403 394 ntBASIC1.88□□□□□ -2.11
VBP1P61758 RPL21P134-201ENST00000453468 483 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC107032.1-201ENST00000485945 480 ntBASIC1.88□□□□□ -2.11
VBP1P61758 OR4G11P-201ENST00000492842 939 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.88□□□□□ -2.11
VBP1P61758 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 SAP18P1-201ENST00000512058 390 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.88□□□□□ -2.11
VBP1P61758 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 AC103783.1-201ENST00000520506 373 ntBASIC1.88□□□□□ -2.11
VBP1P61758 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
VBP1P61758 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.88□□□□□ -2.11
VBP1P61758 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 AL133241.1-201ENST00000556832 487 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.88□□□□□ -2.11
VBP1P61758 AC090897.2-201ENST00000581715 130 ntBASIC1.88□□□□□ -2.11
VBP1P61758 HMGN2P15-201ENST00000585707 270 ntBASIC1.88□□□□□ -2.11
VBP1P61758 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.88□□□□□ -2.11
VBP1P61758 AC006023.1-201ENST00000603944 259 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC007621.1-201ENST00000604544 437 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC008498.1-201ENST00000613012 531 ntBASIC1.88□□□□□ -2.11
VBP1P61758 MIR8057-201ENST00000620957 69 ntBASIC1.88□□□□□ -2.11
VBP1P61758 AC244517.12-201ENST00000623581 663 ntBASIC1.88□□□□□ -2.11
VBP1P61758 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.88□□□□□ -2.11
VBP1P61758 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VBP1P61758 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
VBP1P61758 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VBP1P61758 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
VBP1P61758 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
VBP1P61758 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VBP1P61758 SNORA48.3-201ENST00000391081 134 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AL024474.1-201ENST00000404655 591 ntBASIC1.87□□□□□ -2.11
VBP1P61758 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AC091390.1-201ENST00000433904 331 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.87□□□□□ -2.11
VBP1P61758 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.87□□□□□ -2.11
VBP1P61758 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.87□□□□□ -2.11
VBP1P61758 CDC42P1-201ENST00000456658 548 ntBASIC1.87□□□□□ -2.11
VBP1P61758 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VBP1P61758 AC091965.2-201ENST00000512324 613 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.87□□□□□ -2.11
VBP1P61758 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.87□□□□□ -2.11
VBP1P61758 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.87□□□□□ -2.11
VBP1P61758 UBTFL10-201ENST00000528532 562 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.87□□□□□ -2.11
VBP1P61758 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.87□□□□□ -2.11
VBP1P61758 MIR4299-201ENST00000577899 72 ntBASIC1.87□□□□□ -2.11
VBP1P61758 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
VBP1P61758 VN1R90P-201ENST00000595717 726 ntBASIC1.87□□□□□ -2.11
VBP1P61758 VN1R88P-201ENST00000596787 292 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AL022067.1-201ENST00000602426 454 ntBASIC1.87□□□□□ -2.11
VBP1P61758 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.87□□□□□ -2.11
VBP1P61758 AL450472.3-201ENST00000615578 367 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AC006213.4-201ENST00000616184 634 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AC011330.2-201ENST00000621680 635 ntBASIC1.87□□□□□ -2.11
VBP1P61758 AL590396.2-201ENST00000636511 1041 ntBASIC1.87□□□□□ -2.11
VBP1P61758 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
VBP1P61758 OR4G2P-202ENST00000641004 1759 ntBASIC1.87□□□□□ -2.11
VBP1P61758 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.86□□□□□ -2.11
VBP1P61758 AL450338.1-201ENST00000407987 512 ntBASIC1.86□□□□□ -2.11
VBP1P61758 RNU2-43P-201ENST00000410306 190 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AL133384.1-201ENST00000412744 351 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.86□□□□□ -2.11
VBP1P61758 AL049734.2-201ENST00000441066 616 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AL136380.1-201ENST00000447970 162 ntBASIC1.86□□□□□ -2.11
VBP1P61758 ATG12P2-201ENST00000456830 416 ntBASIC1.86□□□□□ -2.11
VBP1P61758 RPL23AP41-201ENST00000484754 458 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AC138853.1-201ENST00000503549 823 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AC020699.1-201ENST00000505161 445 ntBASIC1.86□□□□□ -2.11
VBP1P61758 MTCO1P31-201ENST00000506355 492 ntBASIC1.86□□□□□ -2.11
VBP1P61758 SCARNA3-201ENST00000517097 143 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.86□□□□□ -2.11
VBP1P61758 AL021997.1-201ENST00000605757 193 ntBASIC1.86□□□□□ -2.11
VBP1P61758 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
VBP1P61758 LINC00216-201ENST00000623548 1126 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AP006437.1-201ENST00000641440 3685 ntBASIC1.86□□□□□ -2.11
VBP1P61758 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.86□□□□□ -2.11
VBP1P61758 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VBP1P61758 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
VBP1P61758 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
VBP1P61758 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.85□□□□□ -2.11
VBP1P61758 SNORD56-201ENST00000413522 71 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC107081.1-201ENST00000414975 361 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.85□□□□□ -2.11
VBP1P61758 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 AL451074.3-201ENST00000437709 472 ntBASIC1.85□□□□□ -2.11
VBP1P61758 RFC5P1-201ENST00000454419 874 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.85□□□□□ -2.11
VBP1P61758 AC113420.1-201ENST00000507903 571 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.85□□□□□ -2.11
VBP1P61758 RNA5SP200-201ENST00000516360 103 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AP002748.2-201ENST00000528671 348 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms