Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 MTND5P26-201ENST00000426018 1752 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.33□□□□□ -1.88
CLDN20P56880 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLDN20P56880 Y_RNA.3-201ENST00000362331 103 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 SNORA73.2-201ENST00000364946 201 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 SNORA5A-201ENST00000384111 134 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 SNORA48.7-201ENST00000391302 135 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AL136372.1-201ENST00000403060 228 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 MTND3P17-201ENST00000416968 344 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 BX295541.1-201ENST00000417774 250 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN20P56880 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 RPL21P66-201ENST00000426566 466 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC104651.1-201ENST00000427559 735 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC137499.1-201ENST00000427602 88 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 ELOCP30-201ENST00000447108 299 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AL162389.1-201ENST00000449233 177 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AL359385.1-201ENST00000456509 365 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 RBM43P1-201ENST00000476891 1081 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 VN1R104P-201ENST00000505115 1009 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC091133.4-201ENST00000511142 308 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 RNA5SP337-201ENST00000517007 109 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC011602.1-201ENST00000546484 331 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 CCNG2P1-201ENST00000549521 1000 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC006960.3-201ENST00000561845 705 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC010546.1-201ENST00000569391 485 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AL391840.1-201ENST00000571144 367 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 AC007687.1-201ENST00000602704 304 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC012443.1-201ENST00000605605 231 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AL161734.1-201ENST00000609720 557 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.33□□□□□ -1.88
CLDN20P56880 TUG1_2.1-201ENST00000614234 87 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC136475.10-201ENST00000620253 385 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC119674.1-207ENST00000641355 633 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC138915.3-201ENST00000562908 1389 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 AC066616.2-201ENST00000559334 1481 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.33□□□□□ -1.88
CLDN20P56880 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
CLDN20P56880 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLDN20P56880 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.33□□□□□ -1.88
CLDN20P56880 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLDN20P56880 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 OR1S2-201ENST00000302592 978 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 RNU6-76P-201ENST00000384060 104 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AL031779.1-201ENST00000415663 330 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 UBE2FP1-201ENST00000416536 447 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 MTCO1P21-201ENST00000416634 589 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 MTATP6P4-201ENST00000427725 675 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 RPL31P35-201ENST00000431058 377 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC024082.2-201ENST00000434771 238 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 DNAJC19P4-201ENST00000440115 345 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC005094.1-201ENST00000440420 368 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 RPS3AP17-201ENST00000472594 777 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 RPS15AP36-201ENST00000492022 382 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AP001086.1-201ENST00000494882 321 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC110768.1-201ENST00000509222 400 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 RNU2-58P-201ENST00000516403 183 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 SNRPGP16-201ENST00000533275 226 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms