Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC068135.2-201ENST00000569293 1028 ntBASIC3.5□□□□□ -1.85
CDH12P55289 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH12P55289 AL034351.1-201ENST00000605288 668 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AP002360.4-201ENST00000606980 481 ntBASIC3.5□□□□□ -1.85
CDH12P55289 BX323046.1-201ENST00000610145 535 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.5□□□□□ -1.85
CDH12P55289 TUG1_2.1-201ENST00000614234 87 ntBASIC3.5□□□□□ -1.85
CDH12P55289 AC004696.1-201ENST00000614345 607 ntBASIC3.5□□□□□ -1.85
CDH12P55289 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
CDH12P55289 MIR6758-201ENST00000620653 63 ntBASIC3.5□□□□□ -1.85
CDH12P55289 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
CDH12P55289 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.5□□□□□ -1.85
CDH12P55289 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH12P55289 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH12P55289 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CDH12P55289 RPL32P3-201ENST00000359025 275 ntBASIC3.49□□□□□ -1.85
CDH12P55289 RNU6-1120P-201ENST00000362988 108 ntBASIC3.49□□□□□ -1.85
CDH12P55289 RNA5SP97-201ENST00000365006 84 ntBASIC3.49□□□□□ -1.85
CDH12P55289 RNU6-882P-201ENST00000391025 103 ntBASIC3.49□□□□□ -1.85
CDH12P55289 Y_RNA.604-201ENST00000410574 102 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 USP9YP27-201ENST00000418455 438 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC002075.2-201ENST00000425207 252 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH12P55289 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 AC004866.2-201ENST00000438285 481 ntBASIC3.49□□□□□ -1.85
CDH12P55289 RPL7P54-201ENST00000438336 674 ntBASIC3.49□□□□□ -1.85
CDH12P55289 SNORA71B-202ENST00000439232 272 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 AL353572.1-201ENST00000442490 417 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.49□□□□□ -1.85
CDH12P55289 AL162389.1-201ENST00000449233 177 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC140076.1-201ENST00000449897 361 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 FDX1P2-201ENST00000450769 375 ntBASIC3.49□□□□□ -1.85
CDH12P55289 SNRPGP6-201ENST00000451124 220 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 RPS23P7-201ENST00000466210 444 ntBASIC3.49□□□□□ -1.85
CDH12P55289 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH12P55289 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 AC093278.1-201ENST00000494700 600 ntBASIC3.49□□□□□ -1.85
CDH12P55289 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 RN7SKP122-201ENST00000515923 296 ntBASIC3.49□□□□□ -1.85
CDH12P55289 RNU6-410P-201ENST00000517006 107 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC008489.1-201ENST00000524271 483 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AP004371.1-201ENST00000525240 214 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC011979.2-201ENST00000527568 352 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH12P55289 AC128657.1-201ENST00000549459 145 ntBASIC3.49□□□□□ -1.85
CDH12P55289 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.49□□□□□ -1.85
CDH12P55289 AC120057.2-201ENST00000571520 271 ntBASIC3.49□□□□□ -1.85
CDH12P55289 KLKP1-201ENST00000595979 403 ntBASIC3.49□□□□□ -1.85
CDH12P55289 SNRPGP15-201ENST00000600149 222 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AL592436.1-201ENST00000605135 558 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AL121992.2-201ENST00000606262 256 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC093788.1-201ENST00000609356 927 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 AC023043.4-201ENST00000612081 449 ntBASIC3.49□□□□□ -1.85
CDH12P55289 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.49□□□□□ -1.85
CDH12P55289 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.49□□□□□ -1.85
CDH12P55289 AC015967.1-201ENST00000619893 476 ntBASIC3.49□□□□□ -1.85
CDH12P55289 MIR6500-201ENST00000622700 86 ntBASIC3.49□□□□□ -1.85
CDH12P55289 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CDH12P55289 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDH12P55289 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDH12P55289 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 ZNF680P1-201ENST00000436625 1469 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDH12P55289 AC073073.2-201ENST00000609827 2578 ntBASIC3.48□□□□□ -1.85
CDH12P55289 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDH12P55289 Y_RNA.89-201ENST00000363031 102 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RNU6-534P-201ENST00000364877 106 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RNU6-1074P-201ENST00000383995 104 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RNY3P14-201ENST00000384309 102 ntBASIC3.48□□□□□ -1.85
CDH12P55289 MIR558-201ENST00000384920 94 ntBASIC3.48□□□□□ -1.85
CDH12P55289 Z98941.1-201ENST00000407764 100 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CDH12P55289 RPL21P24-201ENST00000413752 448 ntBASIC3.48□□□□□ -1.85
CDH12P55289 RPL30P2-201ENST00000414021 291 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH12P55289 RPS29P31-201ENST00000446147 164 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC079781.2-201ENST00000446424 169 ntBASIC3.48□□□□□ -1.85
CDH12P55289 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.48□□□□□ -1.85
CDH12P55289 GAPDHP27-201ENST00000447427 1020 ntBASIC3.48□□□□□ -1.85
CDH12P55289 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.48□□□□□ -1.85
CDH12P55289 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.48□□□□□ -1.85
CDH12P55289 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.48□□□□□ -1.85
CDH12P55289 HMGB1P22-201ENST00000505315 124 ntBASIC3.48□□□□□ -1.85
CDH12P55289 HSPD1P15-201ENST00000505573 1122 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms