Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
CDH4P55283 TPMTP2-201ENST00000414372 726 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC018630.2-202ENST00000422992 927 ntBASIC2.71□□□□□ -1.98
CDH4P55283 NDUFB4P7-201ENST00000423198 363 ntBASIC2.71□□□□□ -1.98
CDH4P55283 OR4K11P-201ENST00000431829 904 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH4P55283 AC129850.1-201ENST00000436203 508 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.71□□□□□ -1.98
CDH4P55283 RPL18AP17-201ENST00000455326 198 ntBASIC2.71□□□□□ -1.98
CDH4P55283 MTND4LP3-201ENST00000468320 276 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
CDH4P55283 RN7SL432P-201ENST00000484057 298 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 AC119751.5-201ENST00000514077 770 ntBASIC2.71□□□□□ -1.98
CDH4P55283 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
CDH4P55283 RNU6-1256P-201ENST00000516539 103 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH4P55283 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDH4P55283 AL132657.2-201ENST00000564417 358 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH4P55283 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CDH4P55283 MIR6130-201ENST00000619419 109 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC068880.5-201ENST00000624331 290 ntBASIC2.71□□□□□ -1.98
CDH4P55283 AC092608.2-201ENST00000624427 218 ntBASIC2.71□□□□□ -1.98
CDH4P55283 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH4P55283 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH4P55283 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CDH4P55283 Y_RNA.234-201ENST00000364409 97 ntBASIC2.7□□□□□ -1.98
CDH4P55283 MIR196B-201ENST00000384852 84 ntBASIC2.7□□□□□ -1.98
CDH4P55283 RNA5SP354-201ENST00000391247 136 ntBASIC2.7□□□□□ -1.98
CDH4P55283 RPLP0P7-201ENST00000416050 667 ntBASIC2.7□□□□□ -1.98
CDH4P55283 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AL513477.1-202ENST00000417061 214 ntBASIC2.7□□□□□ -1.98
CDH4P55283 PPP1R11P2-201ENST00000423543 382 ntBASIC2.7□□□□□ -1.98
CDH4P55283 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH4P55283 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 SEM1P1-201ENST00000506694 209 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC113347.3-201ENST00000509113 148 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 RNA5SP76-201ENST00000516277 87 ntBASIC2.7□□□□□ -1.98
CDH4P55283 MTND2P7-201ENST00000521337 640 ntBASIC2.7□□□□□ -1.98
CDH4P55283 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH4P55283 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.7□□□□□ -1.98
CDH4P55283 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 AMZ2P1-203ENST00000565833 850 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC068135.2-201ENST00000569293 1028 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 MTND3P13-201ENST00000574391 343 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.7□□□□□ -1.98
CDH4P55283 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
CDH4P55283 BBIP1P1-201ENST00000602999 279 ntBASIC2.7□□□□□ -1.98
CDH4P55283 RPL12P50-201ENST00000603116 116 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC024060.1-201ENST00000607052 494 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC123767.1-202ENST00000620407 817 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC002550.2-201ENST00000621246 394 ntBASIC2.7□□□□□ -1.98
CDH4P55283 AC231657.1-201ENST00000624313 397 ntBASIC2.7□□□□□ -1.98
CDH4P55283 OR1S1-201ENST00000624470 978 ntBASIC2.7□□□□□ -1.98
CDH4P55283 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.7□□□□□ -1.98
CDH4P55283 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CDH4P55283 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH4P55283 AC010680.1-201ENST00000590024 3590 ntBASIC2.69□□□□□ -1.98
CDH4P55283 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH4P55283 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDH4P55283 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDH4P55283 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
CDH4P55283 RNU6-1035P-201ENST00000384477 107 ntBASIC2.69□□□□□ -1.98
CDH4P55283 Y_RNA.548-201ENST00000384656 105 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AL590084.1-201ENST00000407885 387 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH4P55283 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH4P55283 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH4P55283 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH4P55283 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.69□□□□□ -1.98
CDH4P55283 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH4P55283 GSTA11P-201ENST00000452866 669 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH4P55283 RNU7-136P-201ENST00000458819 69 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AL135752.1-201ENST00000479477 471 ntBASIC2.69□□□□□ -1.98
CDH4P55283 FAM172BP-201ENST00000487497 1089 ntBASIC2.69□□□□□ -1.98
CDH4P55283 RPS27P26-201ENST00000494583 239 ntBASIC2.69□□□□□ -1.98
CDH4P55283 RNY4P37-201ENST00000516225 96 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH4P55283 AC005832.3-201ENST00000537929 631 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AC124947.2-202ENST00000552735 133 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.69□□□□□ -1.98
CDH4P55283 VN1R83P-201ENST00000595685 445 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AC019159.1-201ENST00000605094 187 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AL138955.1-201ENST00000622881 1040 ntBASIC2.69□□□□□ -1.98
CDH4P55283 AC104985.3-201ENST00000623479 597 ntBASIC2.69□□□□□ -1.98
CDH4P55283 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.69□□□□□ -1.98
CDH4P55283 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDH4P55283 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms