Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 SNRPGP5-201ENST00000456003 220 ntBASIC3.99□□□□□ -1.77
COPB1P53618 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 AC023194.1-201ENST00000493084 308 ntBASIC3.99□□□□□ -1.77
COPB1P53618 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.99□□□□□ -1.77
COPB1P53618 SNORA67.7-201ENST00000516664 135 ntBASIC3.99□□□□□ -1.77
COPB1P53618 RNU6-528P-201ENST00000516926 100 ntBASIC3.99□□□□□ -1.77
COPB1P53618 RN7SKP234-201ENST00000517173 224 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AP006245.1-201ENST00000522549 120 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AC022616.3-201ENST00000523940 148 ntBASIC3.99□□□□□ -1.77
COPB1P53618 OR4P1P-201ENST00000530808 1136 ntBASIC3.99□□□□□ -1.77
COPB1P53618 PTP4A1P6-201ENST00000531034 478 ntBASIC3.99□□□□□ -1.77
COPB1P53618 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 AC008739.3-201ENST00000603262 127 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AC012507.3-201ENST00000603556 477 ntBASIC3.99□□□□□ -1.77
COPB1P53618 RNU1-30P-201ENST00000606575 163 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AC008536.2-201ENST00000607284 349 ntBASIC3.99□□□□□ -1.77
COPB1P53618 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 AC139792.3-201ENST00000623525 224 ntBASIC3.99□□□□□ -1.77
COPB1P53618 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 MIR4496-201ENST00000635896 61 ntBASIC3.99□□□□□ -1.77
COPB1P53618 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COPB1P53618 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COPB1P53618 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COPB1P53618 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COPB1P53618 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.98□□□□□ -1.77
COPB1P53618 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COPB1P53618 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COPB1P53618 RNU6-989P-201ENST00000362756 107 ntBASIC3.98□□□□□ -1.77
COPB1P53618 RNU1-39P-201ENST00000383897 165 ntBASIC3.98□□□□□ -1.77
COPB1P53618 SNORA20.2-201ENST00000383922 131 ntBASIC3.98□□□□□ -1.77
COPB1P53618 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.98□□□□□ -1.77
COPB1P53618 RPL7P60-201ENST00000397636 735 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC138393.2-201ENST00000414742 246 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC007283.2-201ENST00000424739 197 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC006548.1-201ENST00000427470 102 ntBASIC3.98□□□□□ -1.77
COPB1P53618 UBE2V1P13-201ENST00000436983 439 ntBASIC3.98□□□□□ -1.77
COPB1P53618 DPPA3P1-201ENST00000448050 469 ntBASIC3.98□□□□□ -1.77
COPB1P53618 MTCO2P29-201ENST00000465212 189 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC068305.1-201ENST00000497406 726 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.98□□□□□ -1.77
COPB1P53618 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.98□□□□□ -1.77
COPB1P53618 RNU6-1220P-201ENST00000517126 108 ntBASIC3.98□□□□□ -1.77
COPB1P53618 CYCSP30-201ENST00000546447 172 ntBASIC3.98□□□□□ -1.77
COPB1P53618 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.98□□□□□ -1.77
COPB1P53618 AL161713.1-201ENST00000555538 145 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
COPB1P53618 MIR3944-201ENST00000581277 108 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.98□□□□□ -1.77
COPB1P53618 AC068790.3-201ENST00000602988 553 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.98□□□□□ -1.77
COPB1P53618 AL034351.1-201ENST00000605288 668 ntBASIC3.98□□□□□ -1.77
COPB1P53618 MIR6075-201ENST00000620782 95 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC002550.2-201ENST00000621246 394 ntBASIC3.98□□□□□ -1.77
COPB1P53618 AC040168.1-201ENST00000623594 991 ntBASIC3.98□□□□□ -1.77
COPB1P53618 CR381572.1-201ENST00000625098 102 ntBASIC3.98□□□□□ -1.77
COPB1P53618 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.98□□□□□ -1.77
COPB1P53618 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
COPB1P53618 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COPB1P53618 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.98□□□□□ -1.77
COPB1P53618 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
COPB1P53618 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 RNU6-114P-201ENST00000384704 105 ntBASIC3.97□□□□□ -1.77
COPB1P53618 Y_RNA.573-201ENST00000384763 105 ntBASIC3.97□□□□□ -1.77
COPB1P53618 MIR30B-201ENST00000384850 88 ntBASIC3.97□□□□□ -1.77
COPB1P53618 MIR184-201ENST00000384962 84 ntBASIC3.97□□□□□ -1.77
COPB1P53618 RAP1BP3-201ENST00000407180 549 ntBASIC3.97□□□□□ -1.77
COPB1P53618 CCDC58P2-201ENST00000417131 366 ntBASIC3.97□□□□□ -1.77
COPB1P53618 USP9YP27-201ENST00000418455 438 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.97□□□□□ -1.77
COPB1P53618 AL591419.1-201ENST00000427423 339 ntBASIC3.97□□□□□ -1.77
COPB1P53618 FTH1P1-201ENST00000437933 532 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 HMGB1P25-201ENST00000468402 607 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.97□□□□□ -1.77
COPB1P53618 AC020893.1-201ENST00000502452 580 ntBASIC3.97□□□□□ -1.77
COPB1P53618 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.97□□□□□ -1.77
COPB1P53618 RNU6-358P-201ENST00000516564 75 ntBASIC3.97□□□□□ -1.77
COPB1P53618 RNA5SP337-201ENST00000517007 109 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.97□□□□□ -1.77
COPB1P53618 AC090572.1-201ENST00000519251 160 ntBASIC3.97□□□□□ -1.77
COPB1P53618 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.97□□□□□ -1.77
COPB1P53618 AC104383.1-201ENST00000530297 370 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 SETP7-201ENST00000552169 453 ntBASIC3.97□□□□□ -1.77
COPB1P53618 SUB1P2-201ENST00000556401 297 ntBASIC3.97□□□□□ -1.77
COPB1P53618 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.97□□□□□ -1.77
COPB1P53618 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms