Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL133384.1-201ENST00000412744 351 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL139156.1-201ENST00000412785 841 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL357078.2-201ENST00000416486 427 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.8□□□□□ -2.12
GTF2A1P52655 AC234781.2-201ENST00000426370 994 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC004866.2-201ENST00000438285 481 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL714022.1-201ENST00000439897 151 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.8□□□□□ -2.12
GTF2A1P52655 HIGD1AP2-201ENST00000446367 280 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 RPL23AP3-201ENST00000453844 468 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC116337.2-201ENST00000477662 156 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 RPL31P60-201ENST00000478450 367 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.8□□□□□ -2.12
GTF2A1P52655 AP005639.2-201ENST00000527592 928 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AP001646.1-201ENST00000527936 915 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.8□□□□□ -2.12
GTF2A1P52655 HMGB1P14-201ENST00000557424 591 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC135628.1-201ENST00000568867 534 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.8□□□□□ -2.12
GTF2A1P52655 MIR4529-201ENST00000578110 78 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC090312.2-201ENST00000582687 378 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC007938.3-201ENST00000604965 623 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC025034.2-201ENST00000623264 286 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AP003485.2-201ENST00000623636 610 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC073308.1-201ENST00000623696 305 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.8□□□□□ -2.12
GTF2A1P52655 AC243829.7-201ENST00000633081 225 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 AC068620.4-201ENST00000636730 1182 ntBASIC1.8□□□□□ -2.12
GTF2A1P52655 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
GTF2A1P52655 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
GTF2A1P52655 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
GTF2A1P52655 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 Y_RNA.333-201ENST00000365274 102 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AC068050.1-201ENST00000394891 380 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 RN7SKP51-201ENST00000410781 304 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.79□□□□□ -2.12
GTF2A1P52655 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF2A1P52655 RNF19BPX-201ENST00000426224 625 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 GTF2IP20-201ENST00000431663 360 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AC236972.1-201ENST00000433225 199 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AC124916.1-201ENST00000444020 547 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF2A1P52655 AC107626.1-201ENST00000471084 183 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 AC004924.1-201ENST00000480160 781 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 SUMO1P1-201ENST00000497904 306 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF2A1P52655 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.79□□□□□ -2.12
GTF2A1P52655 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.79□□□□□ -2.12
GTF2A1P52655 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GTF2A1P52655 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
GTF2A1P52655 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
GTF2A1P52655 MTCYBP23-201ENST00000558717 1102 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.79□□□□□ -2.12
GTF2A1P52655 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.79□□□□□ -2.12
GTF2A1P52655 AC003001.2-201ENST00000616294 831 ntBASIC1.79□□□□□ -2.12
GTF2A1P52655 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
GTF2A1P52655 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
GTF2A1P52655 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
GTF2A1P52655 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
GTF2A1P52655 SNORA23-201ENST00000365128 182 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 SNORA70.4-201ENST00000365509 134 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
GTF2A1P52655 SNORA11.4-201ENST00000408823 129 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 RNU4-74P-201ENST00000411280 161 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC003685.2-201ENST00000422795 395 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC090774.1-201ENST00000435925 246 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC016691.1-201ENST00000441321 413 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.78□□□□□ -2.12
GTF2A1P52655 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.78□□□□□ -2.12
GTF2A1P52655 RNU7-23P-201ENST00000459465 62 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC027575.1-201ENST00000481064 460 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.78□□□□□ -2.12
GTF2A1P52655 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
GTF2A1P52655 LINC00933-203ENST00000559812 219 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.78□□□□□ -2.12
GTF2A1P52655 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.78□□□□□ -2.12
GTF2A1P52655 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.78□□□□□ -2.12
GTF2A1P52655 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 AC010378.1-201ENST00000619270 362 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.78□□□□□ -2.12
GTF2A1P52655 MKKS-204ENST00000639674 192 ntBASIC1.78□□□□□ -2.12
GTF2A1P52655 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
GTF2A1P52655 RNU1-91P-201ENST00000364746 163 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
GTF2A1P52655 RNU6-220P-201ENST00000390919 107 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 RPL27AP8-201ENST00000424277 446 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AL035410.1-201ENST00000427409 427 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AL831737.1-201ENST00000441288 271 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.77□□□□□ -2.13
GTF2A1P52655 EEF1B2P7-201ENST00000451177 676 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.77□□□□□ -2.13
GTF2A1P52655 AC093770.1-201ENST00000511559 571 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.77□□□□□ -2.13
GTF2A1P52655 IGKV3-31-201ENST00000523109 329 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 AP003122.3-201ENST00000526316 255 ntBASIC1.77□□□□□ -2.13
GTF2A1P52655 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms