Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HMGN1P24-201ENST00000412282 298 ntBASIC5.21□□□□□ -1.58
USP11P51784 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.21□□□□□ -1.58
USP11P51784 EIF4EP1-201ENST00000422311 642 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC099336.2-201ENST00000422457 254 ntBASIC5.21□□□□□ -1.58
USP11P51784 SNAP23P1-201ENST00000433229 246 ntBASIC5.21□□□□□ -1.58
USP11P51784 AL353691.1-201ENST00000451332 387 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC099560.2-201ENST00000457554 255 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU7-59P-201ENST00000459101 61 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC092451.1-201ENST00000480211 153 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC116655.1-201ENST00000508324 901 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.21□□□□□ -1.58
USP11P51784 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.21□□□□□ -1.58
USP11P51784 RNA5SP464-201ENST00000516251 108 ntBASIC5.21□□□□□ -1.58
USP11P51784 Y_RNA.680-201ENST00000516441 93 ntBASIC5.21□□□□□ -1.58
USP11P51784 Y_RNA.708-201ENST00000516950 96 ntBASIC5.21□□□□□ -1.58
USP11P51784 RN7SKP40-201ENST00000517211 242 ntBASIC5.21□□□□□ -1.58
USP11P51784 RN7SKP92-201ENST00000517266 244 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.21□□□□□ -1.58
USP11P51784 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.21□□□□□ -1.58
USP11P51784 FAM60DP-201ENST00000524174 632 ntBASIC5.21□□□□□ -1.58
USP11P51784 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 AL133153.1-201ENST00000557756 303 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC209154.1-201ENST00000582156 337 ntBASIC5.21□□□□□ -1.58
USP11P51784 RN7SL52P-201ENST00000584271 284 ntBASIC5.21□□□□□ -1.58
USP11P51784 NF1P5-201ENST00000588287 448 ntBASIC5.21□□□□□ -1.58
USP11P51784 PISRT1.1-201ENST00000616930 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 RN7SL722P-201ENST00000617780 284 ntBASIC5.21□□□□□ -1.58
USP11P51784 RN7SL565P-201ENST00000618246 284 ntBASIC5.21□□□□□ -1.58
USP11P51784 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.21□□□□□ -1.58
USP11P51784 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 TPTE2P4-201ENST00000258589 1605 ntBASIC5.21□□□□□ -1.58
USP11P51784 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP11P51784 AC005332.5-201ENST00000591222 2919 ntBASIC5.2□□□□□ -1.58
USP11P51784 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP11P51784 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP11P51784 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
USP11P51784 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 RNU6-490P-201ENST00000362985 107 ntBASIC5.2□□□□□ -1.58
USP11P51784 RNU6-266P-201ENST00000364225 107 ntBASIC5.2□□□□□ -1.58
USP11P51784 MIR141-201ENST00000384975 95 ntBASIC5.2□□□□□ -1.58
USP11P51784 MIR921-201ENST00000401133 56 ntBASIC5.2□□□□□ -1.58
USP11P51784 RNU4-46P-201ENST00000410818 138 ntBASIC5.2□□□□□ -1.58
USP11P51784 RNU6-603P-201ENST00000411403 107 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC016397.1-201ENST00000412463 242 ntBASIC5.2□□□□□ -1.58
USP11P51784 BX682237.1-201ENST00000415016 335 ntBASIC5.2□□□□□ -1.58
USP11P51784 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 AL590632.1-201ENST00000424289 371 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC234779.1-201ENST00000425910 285 ntBASIC5.2□□□□□ -1.58
USP11P51784 AL031736.2-201ENST00000426573 787 ntBASIC5.2□□□□□ -1.58
USP11P51784 RPL23AP1-201ENST00000428990 471 ntBASIC5.2□□□□□ -1.58
USP11P51784 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 RPL36AP6-201ENST00000435770 321 ntBASIC5.2□□□□□ -1.58
USP11P51784 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 AC009220.1-201ENST00000451614 275 ntBASIC5.2□□□□□ -1.58
USP11P51784 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 AC116533.1-201ENST00000459748 321 ntBASIC5.2□□□□□ -1.58
USP11P51784 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 AC021146.3-201ENST00000511911 260 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 RNU6-408P-201ENST00000515910 100 ntBASIC5.2□□□□□ -1.58
USP11P51784 AP001781.1-201ENST00000530977 207 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.2□□□□□ -1.58
USP11P51784 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.2□□□□□ -1.58
USP11P51784 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.2□□□□□ -1.58
USP11P51784 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP11P51784 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 AC018462.2-201ENST00000605375 395 ntBASIC5.2□□□□□ -1.58
USP11P51784 SNORD91B-202ENST00000608459 222 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC020634.1-201ENST00000608701 549 ntBASIC5.2□□□□□ -1.58
USP11P51784 AC116447.1-201ENST00000613153 453 ntBASIC5.2□□□□□ -1.58
USP11P51784 MIR6810-201ENST00000622701 70 ntBASIC5.2□□□□□ -1.58
USP11P51784 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP11P51784 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP11P51784 OR56B2P-202ENST00000641377 2453 ntBASIC5.19□□□□□ -1.58
USP11P51784 RNU1-115P-201ENST00000365329 160 ntBASIC5.19□□□□□ -1.58
USP11P51784 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP11P51784 RNU6-823P-201ENST00000391042 103 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.19□□□□□ -1.58
USP11P51784 AC069218.2-201ENST00000411665 344 ntBASIC5.19□□□□□ -1.58
USP11P51784 COX6CP15-201ENST00000426313 211 ntBASIC5.19□□□□□ -1.58
USP11P51784 AC236972.1-201ENST00000433225 199 ntBASIC5.19□□□□□ -1.58
USP11P51784 HIGD1AP11-201ENST00000438361 280 ntBASIC5.19□□□□□ -1.58
USP11P51784 HMGB3P21-201ENST00000452483 547 ntBASIC5.19□□□□□ -1.58
USP11P51784 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.19□□□□□ -1.58
USP11P51784 AC104472.2-201ENST00000469035 601 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms